Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HCN1O60741 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.28■□□□□ 0.04
HCN1O60741 FAM86C2P-203ENST00000528684 1004 ntBASIC15.28■□□□□ 0.04
HCN1O60741 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.28■□□□□ 0.04
HCN1O60741 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HCN1O60741 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.28■□□□□ 0.04
HCN1O60741 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.28■□□□□ 0.04
HCN1O60741 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.28■□□□□ 0.04
HCN1O60741 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HCN1O60741 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
HCN1O60741 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.28■□□□□ 0.04
HCN1O60741 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HCN1O60741 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.28■□□□□ 0.04
HCN1O60741 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HCN1O60741 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HCN1O60741 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HCN1O60741 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HCN1O60741 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HCN1O60741 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.28■□□□□ 0.04
HCN1O60741 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
HCN1O60741 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HCN1O60741 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.28■□□□□ 0.04
HCN1O60741 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HCN1O60741 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HCN1O60741 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HCN1O60741 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.27■□□□□ 0.04
HCN1O60741 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HCN1O60741 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HCN1O60741 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.27■□□□□ 0.04
HCN1O60741 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.27■□□□□ 0.04
HCN1O60741 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.27■□□□□ 0.04
HCN1O60741 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HCN1O60741 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
HCN1O60741 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HCN1O60741 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HCN1O60741 AC024909.3-201ENST00000611513 2257 ntBASIC15.27■□□□□ 0.04
HCN1O60741 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HCN1O60741 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
HCN1O60741 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.27■□□□□ 0.04
HCN1O60741 KRT18P28-201ENST00000453838 1332 ntBASIC15.27■□□□□ 0.04
HCN1O60741 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.27■□□□□ 0.04
HCN1O60741 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HCN1O60741 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HCN1O60741 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.27■□□□□ 0.04
HCN1O60741 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.27■□□□□ 0.04
HCN1O60741 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.27■□□□□ 0.04
HCN1O60741 HCG4-201ENST00000418983 998 ntBASIC15.27■□□□□ 0.04
HCN1O60741 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HCN1O60741 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.27■□□□□ 0.04
HCN1O60741 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.27■□□□□ 0.04
HCN1O60741 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.27■□□□□ 0.04
HCN1O60741 AC091167.2-201ENST00000579581 588 ntBASIC15.27■□□□□ 0.04
HCN1O60741 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.27■□□□□ 0.04
HCN1O60741 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.27■□□□□ 0.04
HCN1O60741 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.27■□□□□ 0.04
HCN1O60741 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.27■□□□□ 0.03
HCN1O60741 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
HCN1O60741 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HCN1O60741 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
HCN1O60741 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.03
HCN1O60741 ME2P1-201ENST00000426028 1970 ntBASIC15.27■□□□□ 0.03
HCN1O60741 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HCN1O60741 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HCN1O60741 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HCN1O60741 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HCN1O60741 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HCN1O60741 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.27■□□□□ 0.03
HCN1O60741 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HCN1O60741 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
HCN1O60741 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.27■□□□□ 0.03
HCN1O60741 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.27■□□□□ 0.03
HCN1O60741 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.26■□□□□ 0.03
HCN1O60741 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.26■□□□□ 0.03
HCN1O60741 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HCN1O60741 AC104640.1-201ENST00000562617 2109 ntBASIC15.26■□□□□ 0.03
HCN1O60741 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.26■□□□□ 0.03
HCN1O60741 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
HCN1O60741 TOP3BP1-201ENST00000420768 1380 ntBASIC15.26■□□□□ 0.03
HCN1O60741 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 AC092364.2-201ENST00000596710 2692 ntBASIC15.26■□□□□ 0.03
HCN1O60741 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.26■□□□□ 0.03
HCN1O60741 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 AC092919.2-201ENST00000623631 1645 ntBASIC15.26■□□□□ 0.03
HCN1O60741 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
HCN1O60741 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.26■□□□□ 0.03
HCN1O60741 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms