Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PCDHGA12O60330 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA12O60330 RPL37AP1-201ENST00000412502 279 ntBASIC16.14■□□□□ 0.17
PCDHGA12O60330 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGA12O60330 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA12O60330 ZNF890P-202ENST00000530367 1156 ntBASIC16.14■□□□□ 0.17
PCDHGA12O60330 AC140912.1-201ENST00000577171 1054 ntBASIC16.14■□□□□ 0.17
PCDHGA12O60330 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGA12O60330 AL132655.2-201ENST00000596276 594 ntBASIC16.14■□□□□ 0.17
PCDHGA12O60330 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA12O60330 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA12O60330 BTBD7P1-201ENST00000447253 1453 ntBASIC16.14■□□□□ 0.17
PCDHGA12O60330 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA12O60330 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGA12O60330 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA12O60330 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA12O60330 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA12O60330 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA12O60330 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGA12O60330 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGA12O60330 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
PCDHGA12O60330 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA12O60330 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA12O60330 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA12O60330 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PCDHGA12O60330 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA12O60330 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.13■□□□□ 0.17
PCDHGA12O60330 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA12O60330 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHGA12O60330 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA12O60330 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA12O60330 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA12O60330 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PCDHGA12O60330 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA12O60330 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA12O60330 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PCDHGA12O60330 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA12O60330 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA12O60330 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA12O60330 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA12O60330 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA12O60330 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA12O60330 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA12O60330 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA12O60330 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.13■□□□□ 0.17
PCDHGA12O60330 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.13■□□□□ 0.17
PCDHGA12O60330 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGA12O60330 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PCDHGA12O60330 API5-211ENST00000534695 560 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHGA12O60330 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHGA12O60330 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDHGA12O60330 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.13■□□□□ 0.17
PCDHGA12O60330 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDHGA12O60330 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.13■□□□□ 0.17
PCDHGA12O60330 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGA12O60330 AC007541.1-201ENST00000570282 1469 ntBASIC16.13■□□□□ 0.17
PCDHGA12O60330 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA12O60330 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA12O60330 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA12O60330 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA12O60330 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA12O60330 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA12O60330 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.13■□□□□ 0.17
PCDHGA12O60330 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGA12O60330 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA12O60330 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA12O60330 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGA12O60330 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA12O60330 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHGA12O60330 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA12O60330 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
PCDHGA12O60330 AC073439.1-201ENST00000624121 1774 ntBASIC16.13■□□□□ 0.17
PCDHGA12O60330 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PCDHGA12O60330 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGA12O60330 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA12O60330 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA12O60330 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHGA12O60330 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHGA12O60330 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA12O60330 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA12O60330 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHGA12O60330 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA12O60330 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGA12O60330 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA12O60330 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGA12O60330 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PCDHGA12O60330 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA12O60330 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PCDHGA12O60330 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PCDHGA12O60330 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA12O60330 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PCDHGA12O60330 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.12■□□□□ 0.17
PCDHGA12O60330 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGA12O60330 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA12O60330 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGA12O60330 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA12O60330 ARSEP1-201ENST00000420443 635 ntBASIC16.12■□□□□ 0.17
PCDHGA12O60330 MTND6P24-201ENST00000440466 518 ntBASIC16.12■□□□□ 0.17
PCDHGA12O60330 ATP5G2P4-201ENST00000442175 420 ntBASIC16.12■□□□□ 0.17
PCDHGA12O60330 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms