Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.23■□□□□ 0.03
NTN3O00634 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NTN3O00634 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NTN3O00634 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NTN3O00634 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NTN3O00634 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NTN3O00634 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NTN3O00634 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NTN3O00634 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.22■□□□□ 0.03
NTN3O00634 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.22■□□□□ 0.03
NTN3O00634 AP001282.1-201ENST00000531301 1499 ntBASIC15.22■□□□□ 0.03
NTN3O00634 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NTN3O00634 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NTN3O00634 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NTN3O00634 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NTN3O00634 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NTN3O00634 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NTN3O00634 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.22■□□□□ 0.03
NTN3O00634 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.22■□□□□ 0.03
NTN3O00634 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NTN3O00634 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.22■□□□□ 0.03
NTN3O00634 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NTN3O00634 KRT18P64-201ENST00000434946 1219 ntBASIC15.22■□□□□ 0.03
NTN3O00634 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.22■□□□□ 0.03
NTN3O00634 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.22■□□□□ 0.03
NTN3O00634 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.22■□□□□ 0.03
NTN3O00634 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.22■□□□□ 0.03
NTN3O00634 RPL13AP25-201ENST00000484130 612 ntBASIC15.22■□□□□ 0.03
NTN3O00634 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.22■□□□□ 0.03
NTN3O00634 AC124283.3-201ENST00000570869 594 ntBASIC15.22■□□□□ 0.03
NTN3O00634 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.22■□□□□ 0.03
NTN3O00634 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NTN3O00634 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NTN3O00634 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NTN3O00634 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NTN3O00634 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.22■□□□□ 0.03
NTN3O00634 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.22■□□□□ 0.03
NTN3O00634 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
NTN3O00634 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NTN3O00634 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NTN3O00634 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NTN3O00634 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NTN3O00634 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NTN3O00634 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NTN3O00634 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NTN3O00634 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
NTN3O00634 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.22■□□□□ 0.03
NTN3O00634 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.22■□□□□ 0.03
NTN3O00634 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
NTN3O00634 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NTN3O00634 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NTN3O00634 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.21■□□□□ 0.03
NTN3O00634 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NTN3O00634 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
NTN3O00634 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NTN3O00634 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
NTN3O00634 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NTN3O00634 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NTN3O00634 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NTN3O00634 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.21■□□□□ 0.03
NTN3O00634 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.21■□□□□ 0.03
NTN3O00634 AC136604.1-201ENST00000418535 575 ntBASIC15.21■□□□□ 0.03
NTN3O00634 AC134915.1-201ENST00000426461 574 ntBASIC15.21■□□□□ 0.03
NTN3O00634 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NTN3O00634 KLF2P4-201ENST00000451959 1225 ntBASIC15.21■□□□□ 0.03
NTN3O00634 CTBP2P5-201ENST00000454986 1264 ntBASIC15.21■□□□□ 0.03
NTN3O00634 PHKG1P2-201ENST00000457537 863 ntBASIC15.21■□□□□ 0.03
NTN3O00634 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.21■□□□□ 0.03
NTN3O00634 SLED1-202ENST00000512051 380 ntBASIC15.21■□□□□ 0.03
NTN3O00634 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.21■□□□□ 0.03
NTN3O00634 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.21■□□□□ 0.03
NTN3O00634 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.21■□□□□ 0.03
NTN3O00634 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.21■□□□□ 0.03
NTN3O00634 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.21■□□□□ 0.03
NTN3O00634 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.21■□□□□ 0.03
NTN3O00634 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NTN3O00634 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.21■□□□□ 0.03
NTN3O00634 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.21■□□□□ 0.03
NTN3O00634 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.21■□□□□ 0.03
NTN3O00634 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.21■□□□□ 0.03
NTN3O00634 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.21■□□□□ 0.03
NTN3O00634 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.21■□□□□ 0.03
NTN3O00634 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
NTN3O00634 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
NTN3O00634 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NTN3O00634 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NTN3O00634 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NTN3O00634 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NTN3O00634 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.21■□□□□ 0.02
NTN3O00634 INTS4P2-202ENST00000614726 2019 ntBASIC15.21■□□□□ 0.02
NTN3O00634 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.02
NTN3O00634 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NTN3O00634 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.2■□□□□ 0.02
NTN3O00634 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NTN3O00634 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.2■□□□□ 0.02
NTN3O00634 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
NTN3O00634 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NTN3O00634 AC093525.8-201ENST00000624099 1342 ntBASIC15.2■□□□□ 0.02
NTN3O00634 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NTN3O00634 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms