Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KPNA4O00629 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.32■□□□□ 0.04
KPNA4O00629 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
KPNA4O00629 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
KPNA4O00629 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KPNA4O00629 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.32■□□□□ 0.04
KPNA4O00629 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KPNA4O00629 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.32■□□□□ 0.04
KPNA4O00629 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KPNA4O00629 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
KPNA4O00629 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
KPNA4O00629 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
KPNA4O00629 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KPNA4O00629 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KPNA4O00629 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.32■□□□□ 0.04
KPNA4O00629 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KPNA4O00629 PTCHD3P3-201ENST00000403073 906 ntBASIC15.32■□□□□ 0.04
KPNA4O00629 ELK2BP-201ENST00000415014 1224 ntBASIC15.32■□□□□ 0.04
KPNA4O00629 SAPCD2P3-201ENST00000455031 850 ntBASIC15.32■□□□□ 0.04
KPNA4O00629 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KPNA4O00629 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.32■□□□□ 0.04
KPNA4O00629 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.32■□□□□ 0.04
KPNA4O00629 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.32■□□□□ 0.04
KPNA4O00629 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.32■□□□□ 0.04
KPNA4O00629 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.32■□□□□ 0.04
KPNA4O00629 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KPNA4O00629 AC004706.3-202ENST00000621574 984 ntBASIC15.32■□□□□ 0.04
KPNA4O00629 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.32■□□□□ 0.04
KPNA4O00629 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.32■□□□□ 0.04
KPNA4O00629 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.32■□□□□ 0.04
KPNA4O00629 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.32■□□□□ 0.04
KPNA4O00629 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KPNA4O00629 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KPNA4O00629 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KPNA4O00629 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KPNA4O00629 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
KPNA4O00629 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.32■□□□□ 0.04
KPNA4O00629 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KPNA4O00629 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.32■□□□□ 0.04
KPNA4O00629 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.32■□□□□ 0.04
KPNA4O00629 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.32■□□□□ 0.04
KPNA4O00629 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.32■□□□□ 0.04
KPNA4O00629 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
KPNA4O00629 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KPNA4O00629 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KPNA4O00629 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
KPNA4O00629 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.31■□□□□ 0.04
KPNA4O00629 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.31■□□□□ 0.04
KPNA4O00629 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
KPNA4O00629 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KPNA4O00629 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.31■□□□□ 0.04
KPNA4O00629 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.31■□□□□ 0.04
KPNA4O00629 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KPNA4O00629 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
KPNA4O00629 AL671710.1-201ENST00000610245 2349 ntBASIC15.31■□□□□ 0.04
KPNA4O00629 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.31■□□□□ 0.04
KPNA4O00629 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.31■□□□□ 0.04
KPNA4O00629 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.31■□□□□ 0.04
KPNA4O00629 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KPNA4O00629 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.31■□□□□ 0.04
KPNA4O00629 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KPNA4O00629 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.31■□□□□ 0.04
KPNA4O00629 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.31■□□□□ 0.04
KPNA4O00629 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
KPNA4O00629 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.31■□□□□ 0.04
KPNA4O00629 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
KPNA4O00629 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.31■□□□□ 0.04
KPNA4O00629 AC025062.2-201ENST00000605477 670 ntBASIC15.31■□□□□ 0.04
KPNA4O00629 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KPNA4O00629 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
KPNA4O00629 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.31■□□□□ 0.04
KPNA4O00629 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
KPNA4O00629 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KPNA4O00629 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.31■□□□□ 0.04
KPNA4O00629 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
KPNA4O00629 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.31■□□□□ 0.04
KPNA4O00629 TOP3BP1-201ENST00000420768 1380 ntBASIC15.31■□□□□ 0.04
KPNA4O00629 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KPNA4O00629 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KPNA4O00629 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KPNA4O00629 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.31■□□□□ 0.04
KPNA4O00629 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KPNA4O00629 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
KPNA4O00629 AC006504.4-201ENST00000592118 1568 ntBASIC15.31■□□□□ 0.04
KPNA4O00629 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KPNA4O00629 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KPNA4O00629 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.31■□□□□ 0.04
KPNA4O00629 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
KPNA4O00629 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KPNA4O00629 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
KPNA4O00629 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.31■□□□□ 0.04
KPNA4O00629 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.31■□□□□ 0.04
KPNA4O00629 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.31■□□□□ 0.04
KPNA4O00629 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.31■□□□□ 0.04
KPNA4O00629 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.31■□□□□ 0.04
KPNA4O00629 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.31■□□□□ 0.04
KPNA4O00629 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.31■□□□□ 0.04
KPNA4O00629 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.31■□□□□ 0.04
KPNA4O00629 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.31■□□□□ 0.04
KPNA4O00629 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms