Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC19.31■□□□□ 0.68
NFKBIEO00221 KSR1-207ENST00000578981 748 ntTSL 4 BASIC19.31■□□□□ 0.68
NFKBIEO00221 MIR5572-201ENST00000583188 137 ntBASIC19.31■□□□□ 0.68
NFKBIEO00221 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC19.31■□□□□ 0.68
NFKBIEO00221 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC19.31■□□□□ 0.68
NFKBIEO00221 AC128714.1-201ENST00000637035 887 ntBASIC19.31■□□□□ 0.68
NFKBIEO00221 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC19.31■□□□□ 0.68
NFKBIEO00221 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
NFKBIEO00221 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NFKBIEO00221 DRD5P1-201ENST00000456605 1438 ntBASIC19.31■□□□□ 0.68
NFKBIEO00221 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NFKBIEO00221 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.31■□□□□ 0.68
NFKBIEO00221 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NFKBIEO00221 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.31■□□□□ 0.68
NFKBIEO00221 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.31■□□□□ 0.68
NFKBIEO00221 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC19.31■□□□□ 0.68
NFKBIEO00221 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NFKBIEO00221 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
NFKBIEO00221 AL138709.1-201ENST00000614840 1693 ntBASIC19.3■□□□□ 0.68
NFKBIEO00221 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NFKBIEO00221 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.3■□□□□ 0.68
NFKBIEO00221 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NFKBIEO00221 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NFKBIEO00221 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NFKBIEO00221 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NFKBIEO00221 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NFKBIEO00221 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NFKBIEO00221 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.3■□□□□ 0.68
NFKBIEO00221 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC19.3■□□□□ 0.68
NFKBIEO00221 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
NFKBIEO00221 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NFKBIEO00221 IMP3P2-201ENST00000489760 475 ntBASIC19.3■□□□□ 0.68
NFKBIEO00221 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NFKBIEO00221 EEF1DP1-201ENST00000585891 896 ntBASIC19.3■□□□□ 0.68
NFKBIEO00221 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
NFKBIEO00221 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC19.3■□□□□ 0.68
NFKBIEO00221 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC19.3■□□□□ 0.68
NFKBIEO00221 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NFKBIEO00221 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NFKBIEO00221 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.3■□□□□ 0.68
NFKBIEO00221 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NFKBIEO00221 AC015818.8-201ENST00000587907 1519 ntBASIC19.3■□□□□ 0.68
NFKBIEO00221 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.3■□□□□ 0.68
NFKBIEO00221 GGT3P-204ENST00000453783 1664 ntBASIC19.3■□□□□ 0.68
NFKBIEO00221 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC19.3■□□□□ 0.68
NFKBIEO00221 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NFKBIEO00221 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
NFKBIEO00221 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NFKBIEO00221 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.3■□□□□ 0.68
NFKBIEO00221 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NFKBIEO00221 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NFKBIEO00221 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.29■□□□□ 0.68
NFKBIEO00221 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NFKBIEO00221 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NFKBIEO00221 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
NFKBIEO00221 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NFKBIEO00221 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NFKBIEO00221 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NFKBIEO00221 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NFKBIEO00221 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NFKBIEO00221 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NFKBIEO00221 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
NFKBIEO00221 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC19.29■□□□□ 0.68
NFKBIEO00221 AL590640.2-201ENST00000457038 527 ntBASIC19.29■□□□□ 0.68
NFKBIEO00221 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC19.29■□□□□ 0.68
NFKBIEO00221 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NFKBIEO00221 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC19.29■□□□□ 0.68
NFKBIEO00221 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC19.29■□□□□ 0.68
NFKBIEO00221 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19.29■□□□□ 0.68
NFKBIEO00221 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.29■□□□□ 0.68
NFKBIEO00221 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC19.28■□□□□ 0.68
NFKBIEO00221 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC19.28■□□□□ 0.68
NFKBIEO00221 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NFKBIEO00221 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NFKBIEO00221 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.28■□□□□ 0.68
NFKBIEO00221 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.28■□□□□ 0.68
NFKBIEO00221 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC19.28■□□□□ 0.68
NFKBIEO00221 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NFKBIEO00221 CSH2-202ENST00000345366 598 ntTSL 5 BASIC19.28■□□□□ 0.68
NFKBIEO00221 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC19.28■□□□□ 0.68
NFKBIEO00221 MIR1202-201ENST00000408529 83 ntBASIC19.28■□□□□ 0.68
NFKBIEO00221 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC19.28■□□□□ 0.68
NFKBIEO00221 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC19.28■□□□□ 0.68
NFKBIEO00221 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC19.28■□□□□ 0.68
NFKBIEO00221 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC19.28■□□□□ 0.68
NFKBIEO00221 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC19.28■□□□□ 0.68
NFKBIEO00221 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC19.28■□□□□ 0.68
NFKBIEO00221 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC19.28■□□□□ 0.68
NFKBIEO00221 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC19.28■□□□□ 0.68
NFKBIEO00221 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC19.28■□□□□ 0.68
NFKBIEO00221 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC19.28■□□□□ 0.68
NFKBIEO00221 AL451050.2-201ENST00000606967 682 ntBASIC19.28■□□□□ 0.68
NFKBIEO00221 AC097724.1-201ENST00000609581 426 ntBASIC19.28■□□□□ 0.68
NFKBIEO00221 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC19.28■□□□□ 0.68
NFKBIEO00221 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NFKBIEO00221 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.28■□□□□ 0.68
NFKBIEO00221 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
NFKBIEO00221 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NFKBIEO00221 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NFKBIEO00221 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms