Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3B1O00203 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AP3B1O00203 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3B1O00203 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3B1O00203 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3B1O00203 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3B1O00203 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.48■□□□□ 0.23
AP3B1O00203 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
AP3B1O00203 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
AP3B1O00203 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.48■□□□□ 0.23
AP3B1O00203 PRYP6-201ENST00000514804 343 ntBASIC16.48■□□□□ 0.23
AP3B1O00203 RNA5SP416-201ENST00000516838 111 ntBASIC16.48■□□□□ 0.23
AP3B1O00203 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3B1O00203 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
AP3B1O00203 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.48■□□□□ 0.23
AP3B1O00203 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
AP3B1O00203 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
AP3B1O00203 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AP3B1O00203 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.48■□□□□ 0.23
AP3B1O00203 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.48■□□□□ 0.23
AP3B1O00203 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.48■□□□□ 0.23
AP3B1O00203 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
AP3B1O00203 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.48■□□□□ 0.23
AP3B1O00203 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3B1O00203 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3B1O00203 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3B1O00203 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
AP3B1O00203 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3B1O00203 AL589702.1-201ENST00000641229 1509 ntBASIC16.48■□□□□ 0.23
AP3B1O00203 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.48■□□□□ 0.23
AP3B1O00203 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3B1O00203 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
AP3B1O00203 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3B1O00203 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.48■□□□□ 0.23
AP3B1O00203 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
AP3B1O00203 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3B1O00203 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
AP3B1O00203 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3B1O00203 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.48■□□□□ 0.23
AP3B1O00203 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3B1O00203 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AP3B1O00203 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3B1O00203 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3B1O00203 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3B1O00203 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3B1O00203 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3B1O00203 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
AP3B1O00203 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
AP3B1O00203 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.47■□□□□ 0.23
AP3B1O00203 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3B1O00203 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
AP3B1O00203 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3B1O00203 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3B1O00203 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3B1O00203 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.47■□□□□ 0.23
AP3B1O00203 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3B1O00203 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
AP3B1O00203 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.47■□□□□ 0.23
AP3B1O00203 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.47■□□□□ 0.23
AP3B1O00203 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.47■□□□□ 0.23
AP3B1O00203 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.47■□□□□ 0.23
AP3B1O00203 MIR4321-201ENST00000592276 80 ntBASIC16.47■□□□□ 0.23
AP3B1O00203 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.47■□□□□ 0.23
AP3B1O00203 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.47■□□□□ 0.23
AP3B1O00203 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
AP3B1O00203 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
AP3B1O00203 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3B1O00203 AC063926.3-201ENST00000624734 5658 ntBASIC16.47■□□□□ 0.23
AP3B1O00203 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.47■□□□□ 0.23
AP3B1O00203 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3B1O00203 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
AP3B1O00203 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3B1O00203 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.47■□□□□ 0.23
AP3B1O00203 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.47■□□□□ 0.23
AP3B1O00203 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3B1O00203 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.47■□□□□ 0.23
AP3B1O00203 AC068587.6-202ENST00000641839 5619 ntBASIC16.47■□□□□ 0.23
AP3B1O00203 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
AP3B1O00203 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
AP3B1O00203 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3B1O00203 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.46■□□□□ 0.23
AP3B1O00203 IL9RP2-201ENST00000423948 1312 ntBASIC16.46■□□□□ 0.23
AP3B1O00203 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
AP3B1O00203 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
AP3B1O00203 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
AP3B1O00203 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3B1O00203 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.46■□□□□ 0.23
AP3B1O00203 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
AP3B1O00203 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3B1O00203 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3B1O00203 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.46■□□□□ 0.23
AP3B1O00203 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
AP3B1O00203 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3B1O00203 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3B1O00203 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3B1O00203 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3B1O00203 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.46■□□□□ 0.23
AP3B1O00203 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
AP3B1O00203 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.46■□□□□ 0.23
AP3B1O00203 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms