Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 AC136621.1-201ENST00000624017 2304 ntBASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 DBP-204ENST00000599385 709 ntTSL 3 BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 AC020765.3-201ENST00000613051 740 ntBASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 AP001350.2-201ENST00000625104 1094 ntBASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV5A0A0B4J249 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC12.71□□□□□ -0.38
TRAV5A0A0B4J249 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRAV5A0A0B4J249 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRAV5A0A0B4J249 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRAV5A0A0B4J249 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.71□□□□□ -0.38
TRAV5A0A0B4J249 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRAV5A0A0B4J249 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRAV5A0A0B4J249 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
TRAV5A0A0B4J249 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.71□□□□□ -0.38
TRAV5A0A0B4J249 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRAV5A0A0B4J249 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TRAV5A0A0B4J249 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRAV5A0A0B4J249 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
TRAV5A0A0B4J249 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRAV5A0A0B4J249 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TRAV5A0A0B4J249 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TRAV5A0A0B4J249 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
TRAV5A0A0B4J249 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 AC006504.4-201ENST00000592118 1568 ntBASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 AC107918.2-201ENST00000530817 355 ntBASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms