Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.22■□□□□ 0.03
TRBV5-3A0A0A0MS03 UNC93B6-202ENST00000528242 690 ntBASIC15.22■□□□□ 0.03
TRBV5-3A0A0A0MS03 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.22■□□□□ 0.03
TRBV5-3A0A0A0MS03 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.22■□□□□ 0.03
TRBV5-3A0A0A0MS03 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.22■□□□□ 0.03
TRBV5-3A0A0A0MS03 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.22■□□□□ 0.03
TRBV5-3A0A0A0MS03 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.22■□□□□ 0.03
TRBV5-3A0A0A0MS03 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.22■□□□□ 0.03
TRBV5-3A0A0A0MS03 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
TRBV5-3A0A0A0MS03 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.22■□□□□ 0.03
TRBV5-3A0A0A0MS03 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRBV5-3A0A0A0MS03 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV5-3A0A0A0MS03 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV5-3A0A0A0MS03 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TRBV5-3A0A0A0MS03 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TRBV5-3A0A0A0MS03 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV5-3A0A0A0MS03 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TRBV5-3A0A0A0MS03 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV5-3A0A0A0MS03 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV5-3A0A0A0MS03 AC112693.3-201ENST00000624819 1983 ntBASIC15.22■□□□□ 0.03
TRBV5-3A0A0A0MS03 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.22■□□□□ 0.03
TRBV5-3A0A0A0MS03 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV5-3A0A0A0MS03 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRBV5-3A0A0A0MS03 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-3A0A0A0MS03 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRBV5-3A0A0A0MS03 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRBV5-3A0A0A0MS03 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRBV5-3A0A0A0MS03 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRBV5-3A0A0A0MS03 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRBV5-3A0A0A0MS03 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.02
TRBV5-3A0A0A0MS03 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.21■□□□□ 0.02
TRBV5-3A0A0A0MS03 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 CRYGEP-201ENST00000412192 528 ntBASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 RNA5SP419-201ENST00000515908 135 ntBASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms