Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 HLA-A-201ENST00000376802 1334 ntBASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
RHBDD3Q9Y3P4 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RHBDD3Q9Y3P4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RHBDD3Q9Y3P4 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RHBDD3Q9Y3P4 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
RHBDD3Q9Y3P4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
RHBDD3Q9Y3P4 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RHBDD3Q9Y3P4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RHBDD3Q9Y3P4 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 AC012569.1-201ENST00000591191 1524 ntBASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 AC009947.1-201ENST00000444350 727 ntBASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 CXCL1P1-201ENST00000502804 216 ntBASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 RNA5SP415-201ENST00000517246 115 ntBASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RHBDD3Q9Y3P4 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 VN2R19P-201ENST00000442399 1052 ntBASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 IGHV3-22-201ENST00000520721 359 ntBASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms