Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDZRN3Q9UPQ7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.98■□□□□ 0.95
PDZRN3Q9UPQ7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PDZRN3Q9UPQ7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDZRN3Q9UPQ7 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC20.98■□□□□ 0.95
PDZRN3Q9UPQ7 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDZRN3Q9UPQ7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC20.98■□□□□ 0.95
PDZRN3Q9UPQ7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC20.98■□□□□ 0.95
PDZRN3Q9UPQ7 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC20.98■□□□□ 0.95
PDZRN3Q9UPQ7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDZRN3Q9UPQ7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDZRN3Q9UPQ7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PDZRN3Q9UPQ7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDZRN3Q9UPQ7 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PDZRN3Q9UPQ7 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PDZRN3Q9UPQ7 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PDZRN3Q9UPQ7 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC20.98■□□□□ 0.95
PDZRN3Q9UPQ7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC20.98■□□□□ 0.95
PDZRN3Q9UPQ7 AC007274.1-201ENST00000439805 662 ntBASIC20.98■□□□□ 0.95
PDZRN3Q9UPQ7 AC004233.3-201ENST00000607794 1269 ntBASIC20.98■□□□□ 0.95
PDZRN3Q9UPQ7 AP001350.2-201ENST00000625104 1094 ntBASIC20.98■□□□□ 0.95
PDZRN3Q9UPQ7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC20.98■□□□□ 0.95
PDZRN3Q9UPQ7 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC20.98■□□□□ 0.95
PDZRN3Q9UPQ7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC20.98■□□□□ 0.95
PDZRN3Q9UPQ7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PDZRN3Q9UPQ7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PDZRN3Q9UPQ7 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.98■□□□□ 0.95
PDZRN3Q9UPQ7 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDZRN3Q9UPQ7 AL671710.1-201ENST00000610245 2349 ntBASIC20.98■□□□□ 0.95
PDZRN3Q9UPQ7 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDZRN3Q9UPQ7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 HLA-V-201ENST00000429037 534 ntBASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 AC018529.1-201ENST00000613063 361 ntBASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 AL139011.1-202ENST00000642063 584 ntBASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 AL139384.1-201ENST00000612143 3047 ntBASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 TDG-209ENST00000544861 1387 ntTSL 2 BASIC20.97■□□□□ 0.95
PDZRN3Q9UPQ7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDZRN3Q9UPQ7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC20.96■□□□□ 0.95
PDZRN3Q9UPQ7 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDZRN3Q9UPQ7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDZRN3Q9UPQ7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PDZRN3Q9UPQ7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDZRN3Q9UPQ7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDZRN3Q9UPQ7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDZRN3Q9UPQ7 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
PDZRN3Q9UPQ7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDZRN3Q9UPQ7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC20.96■□□□□ 0.95
PDZRN3Q9UPQ7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
PDZRN3Q9UPQ7 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC20.96■□□□□ 0.95
PDZRN3Q9UPQ7 AC007967.4-201ENST00000614700 386 ntBASIC20.96■□□□□ 0.95
PDZRN3Q9UPQ7 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC20.96■□□□□ 0.95
PDZRN3Q9UPQ7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDZRN3Q9UPQ7 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDZRN3Q9UPQ7 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDZRN3Q9UPQ7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDZRN3Q9UPQ7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDZRN3Q9UPQ7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDZRN3Q9UPQ7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC20.96■□□□□ 0.95
PDZRN3Q9UPQ7 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDZRN3Q9UPQ7 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDZRN3Q9UPQ7 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDZRN3Q9UPQ7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDZRN3Q9UPQ7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
PDZRN3Q9UPQ7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDZRN3Q9UPQ7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDZRN3Q9UPQ7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
PDZRN3Q9UPQ7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDZRN3Q9UPQ7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDZRN3Q9UPQ7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDZRN3Q9UPQ7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
PDZRN3Q9UPQ7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms