Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 AC011477.6-201ENST00000604980 1927 ntBASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 ALG1L8P-201ENST00000533887 760 ntBASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 AC009093.7-201ENST00000623853 1223 ntBASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHGC3Q9UN70 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 AL691432.1-201ENST00000596308 1422 ntBASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 AC007950.2-201ENST00000615045 2347 ntBASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 AC134684.3-201ENST00000641758 218 ntBASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHGC3Q9UN70 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGC3Q9UN70 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGC3Q9UN70 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGC3Q9UN70 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGC3Q9UN70 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PCDHGC3Q9UN70 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGC3Q9UN70 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGC3Q9UN70 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms