Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
UBQLN2Q9UHD9 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UBQLN2Q9UHD9 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
UBQLN2Q9UHD9 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBQLN2Q9UHD9 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.85□□□□□ -0.19
UBQLN2Q9UHD9 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBQLN2Q9UHD9 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBQLN2Q9UHD9 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBQLN2Q9UHD9 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UBQLN2Q9UHD9 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.85□□□□□ -0.19
UBQLN2Q9UHD9 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.85□□□□□ -0.19
UBQLN2Q9UHD9 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.85□□□□□ -0.19
UBQLN2Q9UHD9 CDC14C-201ENST00000428251 1719 ntBASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 EGFEM1P-202ENST00000431685 1563 ntBASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 LINC00167-201ENST00000530583 1419 ntBASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 LINC01238-205ENST00000567549 1107 ntBASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 AC087388.1-201ENST00000571370 1112 ntBASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 AL590326.2-201ENST00000625139 305 ntBASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 AC009090.5-201ENST00000624886 2285 ntBASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC13.84□□□□□ -0.19
UBQLN2Q9UHD9 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
UBQLN2Q9UHD9 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
UBQLN2Q9UHD9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
UBQLN2Q9UHD9 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
UBQLN2Q9UHD9 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
UBQLN2Q9UHD9 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
UBQLN2Q9UHD9 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.83□□□□□ -0.19
UBQLN2Q9UHD9 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
UBQLN2Q9UHD9 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.19
UBQLN2Q9UHD9 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
UBQLN2Q9UHD9 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.83□□□□□ -0.19
UBQLN2Q9UHD9 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
UBQLN2Q9UHD9 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
UBQLN2Q9UHD9 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.83□□□□□ -0.19
UBQLN2Q9UHD9 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.83□□□□□ -0.2
UBQLN2Q9UHD9 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms