Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
EBF1Q9UH73 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EBF1Q9UH73 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EBF1Q9UH73 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EBF1Q9UH73 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EBF1Q9UH73 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
EBF1Q9UH73 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
EBF1Q9UH73 AC073439.1-201ENST00000624121 1774 ntBASIC16.6■□□□□ 0.25
EBF1Q9UH73 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EBF1Q9UH73 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
EBF1Q9UH73 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.6■□□□□ 0.25
EBF1Q9UH73 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.6■□□□□ 0.25
EBF1Q9UH73 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.6■□□□□ 0.25
EBF1Q9UH73 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.6■□□□□ 0.25
EBF1Q9UH73 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.6■□□□□ 0.25
EBF1Q9UH73 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
EBF1Q9UH73 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.6■□□□□ 0.25
EBF1Q9UH73 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
EBF1Q9UH73 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
EBF1Q9UH73 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
EBF1Q9UH73 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
EBF1Q9UH73 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
EBF1Q9UH73 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.6■□□□□ 0.25
EBF1Q9UH73 AL391825.1-201ENST00000457671 1364 ntBASIC16.6■□□□□ 0.25
EBF1Q9UH73 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EBF1Q9UH73 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EBF1Q9UH73 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EBF1Q9UH73 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
EBF1Q9UH73 AC138969.3-201ENST00000546612 1459 ntBASIC16.6■□□□□ 0.25
EBF1Q9UH73 AC138932.2-201ENST00000548268 1459 ntBASIC16.6■□□□□ 0.25
EBF1Q9UH73 AC126755.4-201ENST00000549796 1459 ntBASIC16.6■□□□□ 0.25
EBF1Q9UH73 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EBF1Q9UH73 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.6■□□□□ 0.25
EBF1Q9UH73 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
EBF1Q9UH73 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EBF1Q9UH73 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
EBF1Q9UH73 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
EBF1Q9UH73 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
EBF1Q9UH73 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EBF1Q9UH73 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EBF1Q9UH73 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EBF1Q9UH73 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EBF1Q9UH73 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.59■□□□□ 0.25
EBF1Q9UH73 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EBF1Q9UH73 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
EBF1Q9UH73 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.59■□□□□ 0.25
EBF1Q9UH73 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EBF1Q9UH73 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EBF1Q9UH73 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EBF1Q9UH73 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
EBF1Q9UH73 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
EBF1Q9UH73 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EBF1Q9UH73 MTND6P24-201ENST00000440466 518 ntBASIC16.59■□□□□ 0.25
EBF1Q9UH73 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.59■□□□□ 0.25
EBF1Q9UH73 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.59■□□□□ 0.25
EBF1Q9UH73 GPR53P-205ENST00000457298 1084 ntBASIC16.59■□□□□ 0.25
EBF1Q9UH73 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.59■□□□□ 0.25
EBF1Q9UH73 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.59■□□□□ 0.25
EBF1Q9UH73 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.59■□□□□ 0.25
EBF1Q9UH73 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.59■□□□□ 0.25
EBF1Q9UH73 AC105021.1-202ENST00000570572 669 ntBASIC16.59■□□□□ 0.25
EBF1Q9UH73 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
EBF1Q9UH73 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.59■□□□□ 0.25
EBF1Q9UH73 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EBF1Q9UH73 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EBF1Q9UH73 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.59■□□□□ 0.25
EBF1Q9UH73 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.59■□□□□ 0.25
EBF1Q9UH73 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.59■□□□□ 0.25
EBF1Q9UH73 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EBF1Q9UH73 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.59■□□□□ 0.25
EBF1Q9UH73 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
EBF1Q9UH73 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.59■□□□□ 0.25
EBF1Q9UH73 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
EBF1Q9UH73 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.59■□□□□ 0.25
EBF1Q9UH73 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EBF1Q9UH73 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EBF1Q9UH73 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EBF1Q9UH73 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EBF1Q9UH73 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
EBF1Q9UH73 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EBF1Q9UH73 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
EBF1Q9UH73 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EBF1Q9UH73 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
EBF1Q9UH73 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
EBF1Q9UH73 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EBF1Q9UH73 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
EBF1Q9UH73 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
EBF1Q9UH73 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
EBF1Q9UH73 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.58■□□□□ 0.25
EBF1Q9UH73 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.58■□□□□ 0.25
EBF1Q9UH73 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.58■□□□□ 0.25
EBF1Q9UH73 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
EBF1Q9UH73 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.58■□□□□ 0.25
EBF1Q9UH73 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
EBF1Q9UH73 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.58■□□□□ 0.25
EBF1Q9UH73 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
EBF1Q9UH73 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
EBF1Q9UH73 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
EBF1Q9UH73 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
EBF1Q9UH73 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms