Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 KRT8P32-201ENST00000512863 1461 ntBASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 TSN-212ENST00000536142 3328 ntTSL 2 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 SLC35A4-201ENST00000323146 3041 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 MAPT-IT1-201ENST00000624111 3016 ntBASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 AC020658.7-201ENST00000624274 2442 ntBASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 TBL1X-206ENST00000424279 5451 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 AC092053.3-201ENST00000641308 4975 ntBASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 AC112176.1-201ENST00000565428 3024 ntBASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 KRT18P41-201ENST00000518924 1277 ntBASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 CFL2-205ENST00000555765 632 ntTSL 2 BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 MIR497HG-202ENST00000572453 3838 ntBASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 SLC3A1-205ENST00000409387 2334 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42SE1Q9NRR8 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 NPHS1-202ENST00000378910 4276 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 LINC01311-201ENST00000565162 1445 ntBASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42SE1Q9NRR8 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms