Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 RPS2P55-201ENST00000397318 883 ntBASIC13.26□□□□□ -0.29
NKX6-2Q9C056 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 HLA-J-202ENST00000469281 1241 ntBASIC13.26□□□□□ -0.29
NKX6-2Q9C056 AC128688.1-201ENST00000487626 519 ntBASIC13.26□□□□□ -0.29
NKX6-2Q9C056 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 TBC1D3P5-201ENST00000579401 1545 ntBASIC13.26□□□□□ -0.29
NKX6-2Q9C056 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 TMED1-207ENST00000591695 809 ntTSL 5 BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 AC099521.3-201ENST00000624251 2938 ntBASIC13.26□□□□□ -0.29
NKX6-2Q9C056 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 TUBB8P12-201ENST00000308911 1335 ntBASIC13.25□□□□□ -0.29
NKX6-2Q9C056 TUBB7P-202ENST00000428444 1305 ntBASIC13.25□□□□□ -0.29
NKX6-2Q9C056 TUBB8P7-204ENST00000567960 1332 ntBASIC13.25□□□□□ -0.29
NKX6-2Q9C056 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 ENSA-206ENST00000361631 725 ntTSL 2 BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 COX5BP2-201ENST00000392354 334 ntBASIC13.25□□□□□ -0.29
NKX6-2Q9C056 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 AC034232.1-201ENST00000506026 1064 ntBASIC13.25□□□□□ -0.29
NKX6-2Q9C056 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 TCAF1P1-201ENST00000414990 2232 ntBASIC13.25□□□□□ -0.29
NKX6-2Q9C056 AL139385.1-201ENST00000611744 3272 ntBASIC13.25□□□□□ -0.29
NKX6-2Q9C056 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-2Q9C056 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms