Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 RARRES2P9-201ENST00000565168 469 ntBASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 GGT4P-201ENST00000623672 1708 ntBASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 TSPY26P-202ENST00000565928 3884 ntBASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 AC008677.1-201ENST00000519230 1561 ntBASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 HYMAI-201ENST00000635591 3347 ntBASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 PCGF3-213ENST00000620529 1899 ntBASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 MIR770-201ENST00000390219 98 ntBASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 AC107890.1-201ENST00000422478 521 ntBASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 HMGN1P19-201ENST00000436976 333 ntBASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 AC098859.1-201ENST00000502915 1238 ntBASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 DOC2GP-204ENST00000639052 2548 ntBASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms