Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 AC005915.1-201ENST00000624912 2018 ntBASIC9.79□□□□□ -0.84
LIMD2Q9BT23 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 ARTN-206ENST00000472435 402 ntTSL 3 BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 CYB561-217ENST00000582997 877 ntTSL 5 BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 AC064862.7-201ENST00000604520 867 ntBASIC9.79□□□□□ -0.84
LIMD2Q9BT23 AL691432.3-201ENST00000621860 400 ntBASIC9.79□□□□□ -0.84
LIMD2Q9BT23 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 AC092053.1-201ENST00000605787 1936 ntBASIC9.79□□□□□ -0.84
LIMD2Q9BT23 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 CICP4-201ENST00000447359 2812 ntBASIC9.79□□□□□ -0.84
LIMD2Q9BT23 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 AC004817.3-201ENST00000602957 2129 ntBASIC9.79□□□□□ -0.84
LIMD2Q9BT23 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
LIMD2Q9BT23 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 SRC-202ENST00000373558 4304 ntTSL 5 BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 INIP-202ENST00000374236 874 ntTSL 2 BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 LSM5-204ENST00000409909 740 ntTSL 2 BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 STARD13-205ENST00000439831 945 ntTSL 2 BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 SDCCAG3P1-201ENST00000589292 1150 ntBASIC9.78□□□□□ -0.84
LIMD2Q9BT23 TERC-201ENST00000602385 541 ntBASIC9.78□□□□□ -0.84
LIMD2Q9BT23 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms