Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.98□□□□□ -0.17
COL12A1Q99715 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL12A1Q99715 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
COL12A1Q99715 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL12A1Q99715 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COL12A1Q99715 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COL12A1Q99715 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
COL12A1Q99715 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
COL12A1Q99715 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL12A1Q99715 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL12A1Q99715 AC006001.1-201ENST00000325130 474 ntBASIC13.98□□□□□ -0.17
COL12A1Q99715 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.98□□□□□ -0.17
COL12A1Q99715 RN7SL181P-201ENST00000462921 277 ntBASIC13.98□□□□□ -0.17
COL12A1Q99715 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL12A1Q99715 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
COL12A1Q99715 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.98□□□□□ -0.17
COL12A1Q99715 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.98□□□□□ -0.17
COL12A1Q99715 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
COL12A1Q99715 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL12A1Q99715 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL12A1Q99715 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL12A1Q99715 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
COL12A1Q99715 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL12A1Q99715 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.97□□□□□ -0.17
COL12A1Q99715 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
COL12A1Q99715 AC012441.1-201ENST00000446669 685 ntBASIC13.97□□□□□ -0.17
COL12A1Q99715 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
COL12A1Q99715 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.97□□□□□ -0.17
COL12A1Q99715 RPSAP36-202ENST00000494591 1261 ntBASIC13.97□□□□□ -0.17
COL12A1Q99715 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC13.97□□□□□ -0.17
COL12A1Q99715 NUP210P1-202ENST00000504322 710 ntBASIC13.97□□□□□ -0.17
COL12A1Q99715 AC104596.2-201ENST00000512793 793 ntBASIC13.97□□□□□ -0.17
COL12A1Q99715 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.97□□□□□ -0.17
COL12A1Q99715 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC13.97□□□□□ -0.17
COL12A1Q99715 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.97□□□□□ -0.17
COL12A1Q99715 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.97□□□□□ -0.17
COL12A1Q99715 AC024267.1-201ENST00000582320 895 ntBASIC13.97□□□□□ -0.17
COL12A1Q99715 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.97□□□□□ -0.17
COL12A1Q99715 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
COL12A1Q99715 AC134312.5-201ENST00000568031 1313 ntBASIC13.97□□□□□ -0.17
COL12A1Q99715 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL12A1Q99715 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
COL12A1Q99715 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL12A1Q99715 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL12A1Q99715 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL12A1Q99715 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL12A1Q99715 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL12A1Q99715 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL12A1Q99715 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.97□□□□□ -0.17
COL12A1Q99715 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
COL12A1Q99715 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL12A1Q99715 SLC25A1P3-201ENST00000395415 828 ntBASIC13.97□□□□□ -0.17
COL12A1Q99715 C2orf27AP3-201ENST00000434123 579 ntBASIC13.97□□□□□ -0.17
COL12A1Q99715 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC13.97□□□□□ -0.17
COL12A1Q99715 SUPT4H1P2-201ENST00000501248 353 ntBASIC13.97□□□□□ -0.17
COL12A1Q99715 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
COL12A1Q99715 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
COL12A1Q99715 AL354718.3-201ENST00000616414 581 ntBASIC13.97□□□□□ -0.17
COL12A1Q99715 CR382287.1-201ENST00000623954 586 ntBASIC13.97□□□□□ -0.17
COL12A1Q99715 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.97□□□□□ -0.17
COL12A1Q99715 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
COL12A1Q99715 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
COL12A1Q99715 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.97□□□□□ -0.17
COL12A1Q99715 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.97□□□□□ -0.17
COL12A1Q99715 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL12A1Q99715 AC006277.1-201ENST00000624348 1610 ntBASIC13.97□□□□□ -0.17
COL12A1Q99715 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
COL12A1Q99715 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
COL12A1Q99715 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COL12A1Q99715 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
COL12A1Q99715 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC13.96□□□□□ -0.17
COL12A1Q99715 PFN2-202ENST00000423691 911 ntTSL 2 BASIC13.96□□□□□ -0.17
COL12A1Q99715 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.96□□□□□ -0.17
COL12A1Q99715 RPL13AP25-201ENST00000484130 612 ntBASIC13.96□□□□□ -0.17
COL12A1Q99715 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.96□□□□□ -0.17
COL12A1Q99715 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.96□□□□□ -0.17
COL12A1Q99715 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC13.96□□□□□ -0.17
COL12A1Q99715 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.96□□□□□ -0.17
COL12A1Q99715 CDK7-214ENST00000626796 358 ntTSL 5 BASIC13.96□□□□□ -0.17
COL12A1Q99715 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.96□□□□□ -0.17
COL12A1Q99715 BICD1-207ENST00000551848 1962 ntBASIC13.96□□□□□ -0.17
COL12A1Q99715 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
COL12A1Q99715 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.96□□□□□ -0.17
COL12A1Q99715 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC13.96□□□□□ -0.17
COL12A1Q99715 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.96□□□□□ -0.17
COL12A1Q99715 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.96□□□□□ -0.17
COL12A1Q99715 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
COL12A1Q99715 PPOX-204ENST00000462866 473 ntTSL 5 BASIC13.96□□□□□ -0.17
COL12A1Q99715 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC13.96□□□□□ -0.17
COL12A1Q99715 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COL12A1Q99715 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
COL12A1Q99715 GMFG-209ENST00000600322 622 ntTSL 5 BASIC13.96□□□□□ -0.17
COL12A1Q99715 AC025181.2-201ENST00000606994 802 ntBASIC13.96□□□□□ -0.17
COL12A1Q99715 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.96□□□□□ -0.17
COL12A1Q99715 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
COL12A1Q99715 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COL12A1Q99715 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COL12A1Q99715 GGT4P-201ENST00000623672 1708 ntBASIC13.96□□□□□ -0.17
COL12A1Q99715 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
COL12A1Q99715 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms