Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CRAMP1Q96RY5 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.66■□□□□ 0.74
CRAMP1Q96RY5 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CRAMP1Q96RY5 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CRAMP1Q96RY5 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC19.66■□□□□ 0.74
CRAMP1Q96RY5 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CRAMP1Q96RY5 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC19.66■□□□□ 0.74
CRAMP1Q96RY5 RPL28-203ENST00000428193 573 ntTSL 2 BASIC19.66■□□□□ 0.74
CRAMP1Q96RY5 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC19.66■□□□□ 0.74
CRAMP1Q96RY5 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC19.66■□□□□ 0.74
CRAMP1Q96RY5 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC19.66■□□□□ 0.74
CRAMP1Q96RY5 RPL28-207ENST00000558815 616 ntTSL 2 BASIC19.66■□□□□ 0.74
CRAMP1Q96RY5 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CRAMP1Q96RY5 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CRAMP1Q96RY5 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CRAMP1Q96RY5 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CRAMP1Q96RY5 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.66■□□□□ 0.74
CRAMP1Q96RY5 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CRAMP1Q96RY5 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CRAMP1Q96RY5 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CRAMP1Q96RY5 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC19.65■□□□□ 0.74
CRAMP1Q96RY5 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.65■□□□□ 0.74
CRAMP1Q96RY5 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CRAMP1Q96RY5 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CRAMP1Q96RY5 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.65■□□□□ 0.74
CRAMP1Q96RY5 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CRAMP1Q96RY5 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CRAMP1Q96RY5 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CRAMP1Q96RY5 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CRAMP1Q96RY5 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC19.65■□□□□ 0.74
CRAMP1Q96RY5 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC19.65■□□□□ 0.74
CRAMP1Q96RY5 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC19.65■□□□□ 0.74
CRAMP1Q96RY5 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC19.65■□□□□ 0.74
CRAMP1Q96RY5 AC120045.2-201ENST00000567334 178 ntBASIC19.65■□□□□ 0.74
CRAMP1Q96RY5 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC19.65■□□□□ 0.74
CRAMP1Q96RY5 GPR182-203ENST00000622922 591 ntBASIC19.65■□□□□ 0.74
CRAMP1Q96RY5 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CRAMP1Q96RY5 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.65■□□□□ 0.74
CRAMP1Q96RY5 KRT8P44-201ENST00000441609 1350 ntBASIC19.65■□□□□ 0.74
CRAMP1Q96RY5 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CRAMP1Q96RY5 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.65■□□□□ 0.74
CRAMP1Q96RY5 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CRAMP1Q96RY5 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CRAMP1Q96RY5 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CRAMP1Q96RY5 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
CRAMP1Q96RY5 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CRAMP1Q96RY5 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.65■□□□□ 0.74
CRAMP1Q96RY5 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CRAMP1Q96RY5 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CRAMP1Q96RY5 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
CRAMP1Q96RY5 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CRAMP1Q96RY5 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CRAMP1Q96RY5 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CRAMP1Q96RY5 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.64■□□□□ 0.74
CRAMP1Q96RY5 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CRAMP1Q96RY5 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CRAMP1Q96RY5 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.64■□□□□ 0.74
CRAMP1Q96RY5 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
CRAMP1Q96RY5 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CRAMP1Q96RY5 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CRAMP1Q96RY5 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CRAMP1Q96RY5 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CRAMP1Q96RY5 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CRAMP1Q96RY5 APOC3-202ENST00000375345 604 ntTSL 5 BASIC19.64■□□□□ 0.73
CRAMP1Q96RY5 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC19.64■□□□□ 0.73
CRAMP1Q96RY5 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19.64■□□□□ 0.73
CRAMP1Q96RY5 AC245100.3-201ENST00000441281 285 ntBASIC19.64■□□□□ 0.73
CRAMP1Q96RY5 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC19.64■□□□□ 0.73
CRAMP1Q96RY5 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC19.64■□□□□ 0.73
CRAMP1Q96RY5 AC007551.1-201ENST00000457394 519 ntBASIC19.64■□□□□ 0.73
CRAMP1Q96RY5 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC19.64■□□□□ 0.73
CRAMP1Q96RY5 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC19.64■□□□□ 0.73
CRAMP1Q96RY5 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC19.64■□□□□ 0.73
CRAMP1Q96RY5 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CRAMP1Q96RY5 AC009486.1-201ENST00000569860 813 ntBASIC19.64■□□□□ 0.73
CRAMP1Q96RY5 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CRAMP1Q96RY5 CLUHP6-201ENST00000580789 941 ntBASIC19.64■□□□□ 0.73
CRAMP1Q96RY5 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC19.64■□□□□ 0.73
CRAMP1Q96RY5 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CRAMP1Q96RY5 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CRAMP1Q96RY5 AC078925.2-201ENST00000624013 1973 ntBASIC19.64■□□□□ 0.73
CRAMP1Q96RY5 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.64■□□□□ 0.73
CRAMP1Q96RY5 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CRAMP1Q96RY5 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CRAMP1Q96RY5 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
CRAMP1Q96RY5 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CRAMP1Q96RY5 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CRAMP1Q96RY5 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.63■□□□□ 0.73
CRAMP1Q96RY5 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CRAMP1Q96RY5 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CRAMP1Q96RY5 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CRAMP1Q96RY5 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CRAMP1Q96RY5 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.63■□□□□ 0.73
CRAMP1Q96RY5 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC19.63■□□□□ 0.73
CRAMP1Q96RY5 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.63■□□□□ 0.73
CRAMP1Q96RY5 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC19.63■□□□□ 0.73
CRAMP1Q96RY5 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CRAMP1Q96RY5 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CRAMP1Q96RY5 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CRAMP1Q96RY5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms