Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF34Q969K3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF34Q969K3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RNF34Q969K3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF34Q969K3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.08■□□□□ 0.32
RNF34Q969K3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
RNF34Q969K3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF34Q969K3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF34Q969K3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF34Q969K3 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF34Q969K3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF34Q969K3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF34Q969K3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RNF34Q969K3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF34Q969K3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF34Q969K3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF34Q969K3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RNF34Q969K3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF34Q969K3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF34Q969K3 AL627223.1-201ENST00000416693 442 ntBASIC17.07■□□□□ 0.32
RNF34Q969K3 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF34Q969K3 AC093724.1-201ENST00000448659 1027 ntBASIC17.07■□□□□ 0.32
RNF34Q969K3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.07■□□□□ 0.32
RNF34Q969K3 LINC01225-203ENST00000563550 1244 ntBASIC17.07■□□□□ 0.32
RNF34Q969K3 AP000842.3-202ENST00000569238 1080 ntBASIC17.07■□□□□ 0.32
RNF34Q969K3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF34Q969K3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF34Q969K3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF34Q969K3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF34Q969K3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF34Q969K3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF34Q969K3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF34Q969K3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RNF34Q969K3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
RNF34Q969K3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF34Q969K3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF34Q969K3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RNF34Q969K3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF34Q969K3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF34Q969K3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
RNF34Q969K3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF34Q969K3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF34Q969K3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF34Q969K3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.06■□□□□ 0.32
RNF34Q969K3 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF34Q969K3 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF34Q969K3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF34Q969K3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF34Q969K3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF34Q969K3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF34Q969K3 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF34Q969K3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF34Q969K3 U82695.1-201ENST00000635752 1889 ntBASIC17.06■□□□□ 0.32
RNF34Q969K3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF34Q969K3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF34Q969K3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF34Q969K3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF34Q969K3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
RNF34Q969K3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RNF34Q969K3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF34Q969K3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF34Q969K3 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF34Q969K3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RNF34Q969K3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF34Q969K3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF34Q969K3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF34Q969K3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
RNF34Q969K3 SLC25A39P2-201ENST00000537614 270 ntBASIC17.06■□□□□ 0.32
RNF34Q969K3 SPTSSB-204ENST00000617024 1292 ntBASIC17.06■□□□□ 0.32
RNF34Q969K3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF34Q969K3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF34Q969K3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF34Q969K3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF34Q969K3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
RNF34Q969K3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF34Q969K3 MIR600HG-201ENST00000449175 5984 ntBASIC17.06■□□□□ 0.32
RNF34Q969K3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
RNF34Q969K3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF34Q969K3 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF34Q969K3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF34Q969K3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF34Q969K3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF34Q969K3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF34Q969K3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF34Q969K3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF34Q969K3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RNF34Q969K3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RNF34Q969K3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF34Q969K3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RNF34Q969K3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF34Q969K3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF34Q969K3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF34Q969K3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
RNF34Q969K3 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RNF34Q969K3 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF34Q969K3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.05■□□□□ 0.32
RNF34Q969K3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF34Q969K3 AC023141.5-201ENST00000458585 616 ntBASIC17.05■□□□□ 0.32
RNF34Q969K3 AC092183.1-201ENST00000469884 875 ntBASIC17.05■□□□□ 0.32
RNF34Q969K3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms