Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 REXO1L3P-201ENST00000622202 1288 ntBASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 AL121956.5-201ENST00000625261 221 ntBASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 AP000550.4-202ENST00000639755 178 ntBASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 OR2I1P-210ENST00000642037 4691 ntBASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 AC016734.2-201ENST00000624325 1377 ntBASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IL1Q8TBN0 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 PPT1-215ENST00000641471 2368 ntBASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 IGHV3-47-201ENST00000425060 335 ntBASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 CYP2A7P1-201ENST00000595391 815 ntBASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 AC023157.3-201ENST00000619086 2088 ntBASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms