Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.38■□□□□ 0.37
LMO3Q8TAP4 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.38■□□□□ 0.37
LMO3Q8TAP4 RARRES2P9-201ENST00000565168 469 ntBASIC17.38■□□□□ 0.37
LMO3Q8TAP4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.38■□□□□ 0.37
LMO3Q8TAP4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
LMO3Q8TAP4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.38■□□□□ 0.37
LMO3Q8TAP4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LMO3Q8TAP4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LMO3Q8TAP4 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LMO3Q8TAP4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
LMO3Q8TAP4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.38■□□□□ 0.37
LMO3Q8TAP4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.38■□□□□ 0.37
LMO3Q8TAP4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LMO3Q8TAP4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.38■□□□□ 0.37
LMO3Q8TAP4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.37■□□□□ 0.37
LMO3Q8TAP4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.37■□□□□ 0.37
LMO3Q8TAP4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LMO3Q8TAP4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LMO3Q8TAP4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LMO3Q8TAP4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LMO3Q8TAP4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
LMO3Q8TAP4 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.36■□□□□ 0.37
LMO3Q8TAP4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.36■□□□□ 0.37
LMO3Q8TAP4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
LMO3Q8TAP4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LMO3Q8TAP4 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LMO3Q8TAP4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LMO3Q8TAP4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
LMO3Q8TAP4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LMO3Q8TAP4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.36■□□□□ 0.37
LMO3Q8TAP4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.36■□□□□ 0.37
LMO3Q8TAP4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.36■□□□□ 0.37
LMO3Q8TAP4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.36■□□□□ 0.37
LMO3Q8TAP4 AP000344.2-201ENST00000512987 629 ntBASIC17.36■□□□□ 0.37
LMO3Q8TAP4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LMO3Q8TAP4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.36■□□□□ 0.37
LMO3Q8TAP4 MIR3687-2-201ENST00000577708 61 ntBASIC17.36■□□□□ 0.37
LMO3Q8TAP4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LMO3Q8TAP4 MIR3687-1-201ENST00000614492 61 ntBASIC17.36■□□□□ 0.37
LMO3Q8TAP4 AC055717.3-201ENST00000622967 595 ntBASIC17.36■□□□□ 0.37
LMO3Q8TAP4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LMO3Q8TAP4 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.36■□□□□ 0.37
LMO3Q8TAP4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LMO3Q8TAP4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LMO3Q8TAP4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LMO3Q8TAP4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.36■□□□□ 0.37
LMO3Q8TAP4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LMO3Q8TAP4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LMO3Q8TAP4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LMO3Q8TAP4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LMO3Q8TAP4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LMO3Q8TAP4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LMO3Q8TAP4 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms