Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 TOP3BP1-201ENST00000420768 1380 ntBASIC12.24□□□□□ -0.45
NUP35Q8NFH5 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 SIGLEC30P-201ENST00000455569 941 ntBASIC12.24□□□□□ -0.45
NUP35Q8NFH5 AC098590.1-201ENST00000468126 897 ntBASIC12.24□□□□□ -0.45
NUP35Q8NFH5 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 CD320-202ENST00000537716 1119 ntTSL 2 BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 AC005336.2-201ENST00000593183 939 ntBASIC12.24□□□□□ -0.45
NUP35Q8NFH5 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.23□□□□□ -0.45
NUP35Q8NFH5 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 GCSHP5-201ENST00000443090 522 ntBASIC12.23□□□□□ -0.45
NUP35Q8NFH5 AL158047.1-201ENST00000445918 881 ntBASIC12.23□□□□□ -0.45
NUP35Q8NFH5 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 AL359075.1-203ENST00000462729 1002 ntBASIC12.23□□□□□ -0.45
NUP35Q8NFH5 GUSBP12-201ENST00000513727 720 ntBASIC12.23□□□□□ -0.45
NUP35Q8NFH5 DHDH-203ENST00000522614 776 ntTSL 5 BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 AC091951.1-201ENST00000512854 2465 ntBASIC12.23□□□□□ -0.45
NUP35Q8NFH5 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 AL390755.1-201ENST00000623716 2027 ntBASIC12.23□□□□□ -0.45
NUP35Q8NFH5 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NUP35Q8NFH5 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms