Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIPK4Q8NE63 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.93■□□□□ 0.14
HIPK4Q8NE63 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.93■□□□□ 0.14
HIPK4Q8NE63 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIPK4Q8NE63 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIPK4Q8NE63 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.93■□□□□ 0.14
HIPK4Q8NE63 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
HIPK4Q8NE63 CDC14C-201ENST00000428251 1719 ntBASIC15.93■□□□□ 0.14
HIPK4Q8NE63 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIPK4Q8NE63 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIPK4Q8NE63 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.93■□□□□ 0.14
HIPK4Q8NE63 ST20-AS1-201ENST00000560255 4223 ntBASIC15.93■□□□□ 0.14
HIPK4Q8NE63 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIPK4Q8NE63 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HIPK4Q8NE63 NSUN5P1-202ENST00000421140 1535 ntBASIC15.93■□□□□ 0.14
HIPK4Q8NE63 NSUN5P2-203ENST00000457352 1529 ntBASIC15.93■□□□□ 0.14
HIPK4Q8NE63 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HIPK4Q8NE63 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIPK4Q8NE63 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
HIPK4Q8NE63 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIPK4Q8NE63 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIPK4Q8NE63 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.93■□□□□ 0.14
HIPK4Q8NE63 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 AC023157.3-201ENST00000619086 2088 ntBASIC15.92■□□□□ 0.14
HIPK4Q8NE63 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 RCN1P2-201ENST00000398357 915 ntBASIC15.92■□□□□ 0.14
HIPK4Q8NE63 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 TOB2P1-201ENST00000469761 992 ntBASIC15.92■□□□□ 0.14
HIPK4Q8NE63 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 AC116407.4-201ENST00000623319 1061 ntBASIC15.92■□□□□ 0.14
HIPK4Q8NE63 AP000867.4-201ENST00000641616 219 ntBASIC15.92■□□□□ 0.14
HIPK4Q8NE63 AC148477.5-201ENST00000625164 1645 ntBASIC15.92■□□□□ 0.14
HIPK4Q8NE63 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.92■□□□□ 0.14
HIPK4Q8NE63 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.92■□□□□ 0.14
HIPK4Q8NE63 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.91■□□□□ 0.14
HIPK4Q8NE63 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIPK4Q8NE63 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.91■□□□□ 0.14
HIPK4Q8NE63 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HIPK4Q8NE63 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIPK4Q8NE63 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.91■□□□□ 0.14
HIPK4Q8NE63 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIPK4Q8NE63 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIPK4Q8NE63 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HIPK4Q8NE63 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.91■□□□□ 0.14
HIPK4Q8NE63 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.91■□□□□ 0.14
HIPK4Q8NE63 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIPK4Q8NE63 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HIPK4Q8NE63 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
HIPK4Q8NE63 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIPK4Q8NE63 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.91■□□□□ 0.14
HIPK4Q8NE63 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIPK4Q8NE63 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HIPK4Q8NE63 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
HIPK4Q8NE63 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.91■□□□□ 0.14
HIPK4Q8NE63 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIPK4Q8NE63 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
HIPK4Q8NE63 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
HIPK4Q8NE63 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HIPK4Q8NE63 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.91■□□□□ 0.14
HIPK4Q8NE63 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
HIPK4Q8NE63 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.91■□□□□ 0.14
HIPK4Q8NE63 FAM210CP-201ENST00000445714 574 ntBASIC15.91■□□□□ 0.14
HIPK4Q8NE63 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.91■□□□□ 0.14
HIPK4Q8NE63 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
HIPK4Q8NE63 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.91■□□□□ 0.14
HIPK4Q8NE63 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HIPK4Q8NE63 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms