Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.03■□□□□ -0
COL27A1Q8IZC6 AC079316.1-201ENST00000548397 411 ntBASIC15.03■□□□□ -0
COL27A1Q8IZC6 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.03■□□□□ -0
COL27A1Q8IZC6 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.03■□□□□ -0
COL27A1Q8IZC6 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.03■□□□□ -0
COL27A1Q8IZC6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
COL27A1Q8IZC6 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.03■□□□□ -0
COL27A1Q8IZC6 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
COL27A1Q8IZC6 AC134312.5-201ENST00000568031 1313 ntBASIC15.02■□□□□ -0
COL27A1Q8IZC6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.02■□□□□ -0
COL27A1Q8IZC6 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
COL27A1Q8IZC6 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.02■□□□□ -0
COL27A1Q8IZC6 ME2P1-201ENST00000426028 1970 ntBASIC15.02■□□□□ -0
COL27A1Q8IZC6 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.02■□□□□ -0
COL27A1Q8IZC6 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
COL27A1Q8IZC6 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.02■□□□□ -0
COL27A1Q8IZC6 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
COL27A1Q8IZC6 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
COL27A1Q8IZC6 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
COL27A1Q8IZC6 AL133267.1-201ENST00000398220 340 ntBASIC15.02■□□□□ -0
COL27A1Q8IZC6 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.02■□□□□ -0
COL27A1Q8IZC6 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.02■□□□□ -0
COL27A1Q8IZC6 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.02■□□□□ -0
COL27A1Q8IZC6 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
COL27A1Q8IZC6 ENPP7P5-201ENST00000541031 1031 ntBASIC15.02■□□□□ -0
COL27A1Q8IZC6 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.02■□□□□ -0
COL27A1Q8IZC6 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.02■□□□□ -0
COL27A1Q8IZC6 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.02■□□□□ -0
COL27A1Q8IZC6 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
COL27A1Q8IZC6 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
COL27A1Q8IZC6 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
COL27A1Q8IZC6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.02□□□□□ -0.01
COL27A1Q8IZC6 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
COL27A1Q8IZC6 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.02□□□□□ -0.01
COL27A1Q8IZC6 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.02□□□□□ -0.01
COL27A1Q8IZC6 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.02□□□□□ -0.01
COL27A1Q8IZC6 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
COL27A1Q8IZC6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
COL27A1Q8IZC6 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
COL27A1Q8IZC6 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 AC005695.3-201ENST00000614522 232 ntBASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 REXO1L1P-202ENST00000608646 1974 ntBASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 GOLGA2P4-201ENST00000441462 777 ntBASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.01□□□□□ -0.01
COL27A1Q8IZC6 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COL27A1Q8IZC6 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COL27A1Q8IZC6 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
COL27A1Q8IZC6 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15□□□□□ -0.01
COL27A1Q8IZC6 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COL27A1Q8IZC6 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COL27A1Q8IZC6 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COL27A1Q8IZC6 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15□□□□□ -0.01
COL27A1Q8IZC6 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15□□□□□ -0.01
COL27A1Q8IZC6 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms