Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 IER3-202ENST00000376377 1350 ntBASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 SSR4P1-203ENST00000599569 2260 ntBASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 AC023157.3-201ENST00000619086 2088 ntBASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 AC004706.3-202ENST00000621574 984 ntBASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
NUDCD3Q8IVD9 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 AC092919.2-201ENST00000623631 1645 ntBASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 AL136379.1-201ENST00000623471 2642 ntBASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NUDCD3Q8IVD9 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NUDCD3Q8IVD9 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms