Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LYSMD2Q8IV50 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 STARP1-201ENST00000397973 869 ntBASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 AL031731.1-201ENST00000642131 2094 ntBASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 BEND3P1-201ENST00000421591 1944 ntBASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
LYSMD2Q8IV50 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 AL512652.2-201ENST00000625156 1716 ntBASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 REXO1L2P-201ENST00000425429 2069 ntBASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 OR2I1P-210ENST00000642037 4691 ntBASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 MROH4P-201ENST00000431302 1578 ntBASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 AC009336.1-201ENST00000608941 1553 ntBASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 AC125634.1-201ENST00000438758 1403 ntBASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 AL031432.5-201ENST00000641059 760 ntBASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 AL353593.2-201ENST00000602529 1483 ntBASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms