Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 AL590627.1-203ENST00000421194 1026 ntBASIC16.99■□□□□ 0.31
RFX6Q8HWS3 AC092474.2-201ENST00000424288 719 ntBASIC16.99■□□□□ 0.31
RFX6Q8HWS3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 AC140658.5-201ENST00000438532 169 ntBASIC16.99■□□□□ 0.31
RFX6Q8HWS3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFX6Q8HWS3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX6Q8HWS3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX6Q8HWS3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.98■□□□□ 0.31
RFX6Q8HWS3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFX6Q8HWS3 AC016027.1-202ENST00000607927 1699 ntBASIC16.98■□□□□ 0.31
RFX6Q8HWS3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RFX6Q8HWS3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFX6Q8HWS3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.98■□□□□ 0.31
RFX6Q8HWS3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.98■□□□□ 0.31
RFX6Q8HWS3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.98■□□□□ 0.31
RFX6Q8HWS3 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.98■□□□□ 0.31
RFX6Q8HWS3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFX6Q8HWS3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.98■□□□□ 0.31
RFX6Q8HWS3 AL078644.1-201ENST00000609881 752 ntBASIC16.98■□□□□ 0.31
RFX6Q8HWS3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFX6Q8HWS3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFX6Q8HWS3 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.98■□□□□ 0.31
RFX6Q8HWS3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.98■□□□□ 0.31
RFX6Q8HWS3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX6Q8HWS3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.98■□□□□ 0.31
RFX6Q8HWS3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX6Q8HWS3 NORAD-201ENST00000565493 5339 ntBASIC16.98■□□□□ 0.31
RFX6Q8HWS3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RFX6Q8HWS3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.98■□□□□ 0.31
RFX6Q8HWS3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX6Q8HWS3 CDC14C-201ENST00000428251 1719 ntBASIC16.98■□□□□ 0.31
RFX6Q8HWS3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX6Q8HWS3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.98■□□□□ 0.31
RFX6Q8HWS3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RFX6Q8HWS3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX6Q8HWS3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFX6Q8HWS3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 LINC02447-202ENST00000501888 2146 ntBASIC16.97■□□□□ 0.31
RFX6Q8HWS3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.97■□□□□ 0.31
RFX6Q8HWS3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 MIR648-201ENST00000385046 94 ntBASIC16.97■□□□□ 0.31
RFX6Q8HWS3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms