Protein–RNA interactions for Protein: Q86YV9

HPS6, Hermansky-Pudlak syndrome 6 protein, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6Q86YV9 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.18■□□□□ 0.18
HPS6Q86YV9 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
HPS6Q86YV9 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
HPS6Q86YV9 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS6Q86YV9 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.17■□□□□ 0.18
HPS6Q86YV9 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS6Q86YV9 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HPS6Q86YV9 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.17■□□□□ 0.18
HPS6Q86YV9 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.17■□□□□ 0.18
HPS6Q86YV9 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
HPS6Q86YV9 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
HPS6Q86YV9 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HPS6Q86YV9 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HPS6Q86YV9 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS6Q86YV9 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HPS6Q86YV9 MKNK2P1-201ENST00000437526 628 ntBASIC16.17■□□□□ 0.18
HPS6Q86YV9 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
HPS6Q86YV9 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HPS6Q86YV9 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.17■□□□□ 0.18
HPS6Q86YV9 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
HPS6Q86YV9 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HPS6Q86YV9 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS6Q86YV9 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS6Q86YV9 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS6Q86YV9 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS6Q86YV9 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HPS6Q86YV9 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
HPS6Q86YV9 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
HPS6Q86YV9 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS6Q86YV9 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS6Q86YV9 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS6Q86YV9 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HPS6Q86YV9 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS6Q86YV9 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.16■□□□□ 0.18
HPS6Q86YV9 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HPS6Q86YV9 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS6Q86YV9 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.16■□□□□ 0.18
HPS6Q86YV9 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
HPS6Q86YV9 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.16■□□□□ 0.18
HPS6Q86YV9 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.16■□□□□ 0.18
HPS6Q86YV9 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.16■□□□□ 0.18
HPS6Q86YV9 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.16■□□□□ 0.18
HPS6Q86YV9 TNRC18P2-201ENST00000417666 2714 ntBASIC16.16■□□□□ 0.18
HPS6Q86YV9 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
HPS6Q86YV9 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
HPS6Q86YV9 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HPS6Q86YV9 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS6Q86YV9 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HPS6Q86YV9 AC023274.1-201ENST00000418278 595 ntBASIC16.16■□□□□ 0.18
HPS6Q86YV9 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.16■□□□□ 0.18
HPS6Q86YV9 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.16■□□□□ 0.18
HPS6Q86YV9 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.16■□□□□ 0.18
HPS6Q86YV9 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.16■□□□□ 0.18
HPS6Q86YV9 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.16■□□□□ 0.18
HPS6Q86YV9 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
HPS6Q86YV9 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.16■□□□□ 0.18
HPS6Q86YV9 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS6Q86YV9 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.16■□□□□ 0.18
HPS6Q86YV9 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS6Q86YV9 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HPS6Q86YV9 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS6Q86YV9 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS6Q86YV9 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS6Q86YV9 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS6Q86YV9 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
HPS6Q86YV9 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HPS6Q86YV9 AL353593.2-201ENST00000602529 1483 ntBASIC16.16■□□□□ 0.18
HPS6Q86YV9 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS6Q86YV9 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HPS6Q86YV9 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HPS6Q86YV9 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS6Q86YV9 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS6Q86YV9 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.15■□□□□ 0.18
HPS6Q86YV9 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS6Q86YV9 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.15■□□□□ 0.18
HPS6Q86YV9 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.15■□□□□ 0.18
HPS6Q86YV9 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HPS6Q86YV9 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.15■□□□□ 0.18
HPS6Q86YV9 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HPS6Q86YV9 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.15■□□□□ 0.18
HPS6Q86YV9 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HPS6Q86YV9 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS6Q86YV9 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS6Q86YV9 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
HPS6Q86YV9 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS6Q86YV9 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS6Q86YV9 AC003669.1-201ENST00000334569 611 ntBASIC16.15■□□□□ 0.18
HPS6Q86YV9 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS6Q86YV9 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS6Q86YV9 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.15■□□□□ 0.18
HPS6Q86YV9 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS6Q86YV9 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.15■□□□□ 0.18
HPS6Q86YV9 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
HPS6Q86YV9 SIGLEC30P-201ENST00000455569 941 ntBASIC16.15■□□□□ 0.18
HPS6Q86YV9 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.15■□□□□ 0.18
HPS6Q86YV9 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HPS6Q86YV9 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.15■□□□□ 0.18
HPS6Q86YV9 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.15■□□□□ 0.18
HPS6Q86YV9 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.15■□□□□ 0.18
HPS6Q86YV9 SNHG9-202ENST00000564014 471 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms