Protein–RNA interactions for Protein: Q76G19

PDZD4, PDZ domain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4Q76G19 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.3■□□□□ 0.36
PDZD4Q76G19 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.3■□□□□ 0.36
PDZD4Q76G19 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.3■□□□□ 0.36
PDZD4Q76G19 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDZD4Q76G19 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.3■□□□□ 0.36
PDZD4Q76G19 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.3■□□□□ 0.36
PDZD4Q76G19 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.3■□□□□ 0.36
PDZD4Q76G19 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.3■□□□□ 0.36
PDZD4Q76G19 AC012645.4-201ENST00000610691 1061 ntBASIC17.3■□□□□ 0.36
PDZD4Q76G19 AL138828.2-201ENST00000615812 383 ntBASIC17.3■□□□□ 0.36
PDZD4Q76G19 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDZD4Q76G19 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDZD4Q76G19 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PDZD4Q76G19 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDZD4Q76G19 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.3■□□□□ 0.36
PDZD4Q76G19 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PDZD4Q76G19 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PDZD4Q76G19 AL671710.1-201ENST00000610245 2349 ntBASIC17.3■□□□□ 0.36
PDZD4Q76G19 AL118508.1-201ENST00000613502 2345 ntBASIC17.3■□□□□ 0.36
PDZD4Q76G19 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDZD4Q76G19 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
PDZD4Q76G19 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDZD4Q76G19 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.29■□□□□ 0.36
PDZD4Q76G19 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDZD4Q76G19 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDZD4Q76G19 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDZD4Q76G19 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDZD4Q76G19 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDZD4Q76G19 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDZD4Q76G19 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDZD4Q76G19 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.29■□□□□ 0.36
PDZD4Q76G19 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PDZD4Q76G19 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.29■□□□□ 0.36
PDZD4Q76G19 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.29■□□□□ 0.36
PDZD4Q76G19 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDZD4Q76G19 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDZD4Q76G19 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDZD4Q76G19 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.29■□□□□ 0.36
PDZD4Q76G19 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.29■□□□□ 0.36
PDZD4Q76G19 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.29■□□□□ 0.36
PDZD4Q76G19 AC244107.1-201ENST00000442033 332 ntBASIC17.29■□□□□ 0.36
PDZD4Q76G19 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.29■□□□□ 0.36
PDZD4Q76G19 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.29■□□□□ 0.36
PDZD4Q76G19 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.29■□□□□ 0.36
PDZD4Q76G19 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.29■□□□□ 0.36
PDZD4Q76G19 AC009118.2-201ENST00000613275 655 ntBASIC17.29■□□□□ 0.36
PDZD4Q76G19 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.29■□□□□ 0.36
PDZD4Q76G19 SPTSSB-204ENST00000617024 1292 ntBASIC17.29■□□□□ 0.36
PDZD4Q76G19 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PDZD4Q76G19 FOXO1B-201ENST00000504678 1527 ntBASIC17.29■□□□□ 0.36
PDZD4Q76G19 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDZD4Q76G19 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDZD4Q76G19 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDZD4Q76G19 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDZD4Q76G19 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.29■□□□□ 0.36
PDZD4Q76G19 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.29■□□□□ 0.36
PDZD4Q76G19 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDZD4Q76G19 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDZD4Q76G19 KRT8P39-201ENST00000396270 1433 ntBASIC17.29■□□□□ 0.36
PDZD4Q76G19 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDZD4Q76G19 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.29■□□□□ 0.36
PDZD4Q76G19 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PDZD4Q76G19 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PDZD4Q76G19 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.28■□□□□ 0.36
PDZD4Q76G19 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.28■□□□□ 0.36
PDZD4Q76G19 AL035456.1-201ENST00000456064 1369 ntBASIC17.28■□□□□ 0.36
PDZD4Q76G19 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDZD4Q76G19 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDZD4Q76G19 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDZD4Q76G19 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PDZD4Q76G19 AC063926.2-201ENST00000623766 1308 ntBASIC17.28■□□□□ 0.36
PDZD4Q76G19 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDZD4Q76G19 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDZD4Q76G19 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDZD4Q76G19 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDZD4Q76G19 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDZD4Q76G19 FAM220BP-201ENST00000377689 816 ntBASIC17.28■□□□□ 0.36
PDZD4Q76G19 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PDZD4Q76G19 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDZD4Q76G19 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDZD4Q76G19 HLA-V-204ENST00000476601 1289 ntBASIC17.28■□□□□ 0.36
PDZD4Q76G19 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.28■□□□□ 0.36
PDZD4Q76G19 SERBP1P5-201ENST00000510079 1181 ntBASIC17.28■□□□□ 0.36
PDZD4Q76G19 AC005225.4-201ENST00000557330 545 ntBASIC17.28■□□□□ 0.36
PDZD4Q76G19 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.28■□□□□ 0.36
PDZD4Q76G19 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.28■□□□□ 0.36
PDZD4Q76G19 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.28■□□□□ 0.36
PDZD4Q76G19 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.28■□□□□ 0.36
PDZD4Q76G19 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDZD4Q76G19 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDZD4Q76G19 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDZD4Q76G19 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDZD4Q76G19 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDZD4Q76G19 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDZD4Q76G19 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.28■□□□□ 0.36
PDZD4Q76G19 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.28■□□□□ 0.36
PDZD4Q76G19 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDZD4Q76G19 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDZD4Q76G19 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDZD4Q76G19 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms