Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMIM5Q71RC9 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SMIM5Q71RC9 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMIM5Q71RC9 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SMIM5Q71RC9 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SMIM5Q71RC9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SMIM5Q71RC9 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.28■□□□□ 0.84
SMIM5Q71RC9 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
SMIM5Q71RC9 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMIM5Q71RC9 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMIM5Q71RC9 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMIM5Q71RC9 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMIM5Q71RC9 ELK2AP-201ENST00000392510 1007 ntBASIC20.28■□□□□ 0.84
SMIM5Q71RC9 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC20.28■□□□□ 0.84
SMIM5Q71RC9 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMIM5Q71RC9 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
SMIM5Q71RC9 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
SMIM5Q71RC9 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC20.28■□□□□ 0.84
SMIM5Q71RC9 DERL2-202ENST00000570848 657 ntTSL 5 BASIC20.28■□□□□ 0.84
SMIM5Q71RC9 GNRHR2-203ENST00000581100 1187 ntBASIC20.28■□□□□ 0.84
SMIM5Q71RC9 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC20.28■□□□□ 0.84
SMIM5Q71RC9 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
SMIM5Q71RC9 AC006538.1-201ENST00000567905 1585 ntBASIC20.28■□□□□ 0.84
SMIM5Q71RC9 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMIM5Q71RC9 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMIM5Q71RC9 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMIM5Q71RC9 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMIM5Q71RC9 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMIM5Q71RC9 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMIM5Q71RC9 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMIM5Q71RC9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMIM5Q71RC9 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 TPO-206ENST00000382269 1155 ntTSL 5 BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 YBX1P6-201ENST00000442962 1002 ntBASIC20.27■□□□□ 0.84
SMIM5Q71RC9 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 AL355864.2-201ENST00000447420 863 ntBASIC20.27■□□□□ 0.84
SMIM5Q71RC9 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 AC120045.2-201ENST00000567334 178 ntBASIC20.27■□□□□ 0.84
SMIM5Q71RC9 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 HADH-212ENST00000638621 741 ntTSL 5 BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM5Q71RC9 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SMIM5Q71RC9 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SMIM5Q71RC9 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.27■□□□□ 0.83
SMIM5Q71RC9 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SMIM5Q71RC9 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
SMIM5Q71RC9 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMIM5Q71RC9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.26■□□□□ 0.83
SMIM5Q71RC9 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms