Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 AC142381.1-201ENST00000426099 345 ntBASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 AC025678.2-201ENST00000562061 970 ntBASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFWD3Q6PCD5 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
RFWD3Q6PCD5 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
RFWD3Q6PCD5 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.02■□□□□ 0.31
RFWD3Q6PCD5 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RFWD3Q6PCD5 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFWD3Q6PCD5 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.02■□□□□ 0.31
RFWD3Q6PCD5 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFWD3Q6PCD5 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFWD3Q6PCD5 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RFWD3Q6PCD5 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
RFWD3Q6PCD5 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 AL513523.2-202ENST00000427283 2040 ntBASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 SPDYE14P-201ENST00000442619 822 ntBASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 AC105233.2-201ENST00000523697 349 ntBASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 AF228730.5-201ENST00000530288 346 ntBASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 ALG1L8P-201ENST00000533887 760 ntBASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 AC026150.2-201ENST00000564693 1156 ntBASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 AC073389.1-201ENST00000595595 795 ntBASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.01■□□□□ 0.31
RFWD3Q6PCD5 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17■□□□□ 0.31
RFWD3Q6PCD5 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFWD3Q6PCD5 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17■□□□□ 0.31
RFWD3Q6PCD5 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17■□□□□ 0.31
RFWD3Q6PCD5 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17■□□□□ 0.31
RFWD3Q6PCD5 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFWD3Q6PCD5 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17■□□□□ 0.31
RFWD3Q6PCD5 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17■□□□□ 0.31
RFWD3Q6PCD5 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFWD3Q6PCD5 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RFWD3Q6PCD5 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFWD3Q6PCD5 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFWD3Q6PCD5 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFWD3Q6PCD5 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
RFWD3Q6PCD5 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17■□□□□ 0.31
RFWD3Q6PCD5 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFWD3Q6PCD5 CD81-202ENST00000381036 880 ntTSL 3 BASIC17■□□□□ 0.31
RFWD3Q6PCD5 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms