Protein–RNA interactions for Protein: Q6P3S1

DENND1B, DENN domain-containing protein 1B, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1BQ6P3S1 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.23■□□□□ 0.35
DENND1BQ6P3S1 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DENND1BQ6P3S1 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
DENND1BQ6P3S1 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.23■□□□□ 0.35
DENND1BQ6P3S1 AP000344.2-201ENST00000512987 629 ntBASIC17.23■□□□□ 0.35
DENND1BQ6P3S1 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DENND1BQ6P3S1 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.23■□□□□ 0.35
DENND1BQ6P3S1 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.23■□□□□ 0.35
DENND1BQ6P3S1 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.23■□□□□ 0.35
DENND1BQ6P3S1 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.23■□□□□ 0.35
DENND1BQ6P3S1 MIR4321-201ENST00000592276 80 ntBASIC17.23■□□□□ 0.35
DENND1BQ6P3S1 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.23■□□□□ 0.35
DENND1BQ6P3S1 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.23■□□□□ 0.35
DENND1BQ6P3S1 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.23■□□□□ 0.35
DENND1BQ6P3S1 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
DENND1BQ6P3S1 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
DENND1BQ6P3S1 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.23■□□□□ 0.35
DENND1BQ6P3S1 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
DENND1BQ6P3S1 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.23■□□□□ 0.35
DENND1BQ6P3S1 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DENND1BQ6P3S1 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DENND1BQ6P3S1 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DENND1BQ6P3S1 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DENND1BQ6P3S1 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
DENND1BQ6P3S1 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DENND1BQ6P3S1 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.22■□□□□ 0.35
DENND1BQ6P3S1 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DENND1BQ6P3S1 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.22■□□□□ 0.35
DENND1BQ6P3S1 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
DENND1BQ6P3S1 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.22■□□□□ 0.35
DENND1BQ6P3S1 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DENND1BQ6P3S1 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DENND1BQ6P3S1 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DENND1BQ6P3S1 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
DENND1BQ6P3S1 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.22■□□□□ 0.35
DENND1BQ6P3S1 AC008741.2-201ENST00000612792 3115 ntBASIC17.22■□□□□ 0.35
DENND1BQ6P3S1 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
DENND1BQ6P3S1 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DENND1BQ6P3S1 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.22■□□□□ 0.35
DENND1BQ6P3S1 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.22■□□□□ 0.35
DENND1BQ6P3S1 AP006288.1-201ENST00000446065 395 ntBASIC17.22■□□□□ 0.35
DENND1BQ6P3S1 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.22■□□□□ 0.35
DENND1BQ6P3S1 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DENND1BQ6P3S1 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
DENND1BQ6P3S1 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.22■□□□□ 0.35
DENND1BQ6P3S1 AC061975.2-201ENST00000581722 295 ntBASIC17.22■□□□□ 0.35
DENND1BQ6P3S1 AC004835.2-201ENST00000603762 682 ntBASIC17.22■□□□□ 0.35
DENND1BQ6P3S1 AL365330.1-201ENST00000607459 531 ntBASIC17.22■□□□□ 0.35
DENND1BQ6P3S1 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DENND1BQ6P3S1 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
DENND1BQ6P3S1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DENND1BQ6P3S1 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DENND1BQ6P3S1 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.22■□□□□ 0.35
DENND1BQ6P3S1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DENND1BQ6P3S1 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.22■□□□□ 0.35
DENND1BQ6P3S1 AC010491.1-201ENST00000563101 2797 ntBASIC17.22■□□□□ 0.35
DENND1BQ6P3S1 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 AP3S2-216ENST00000617003 1561 ntBASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 MIR648-201ENST00000385046 94 ntBASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 KRT18P32-201ENST00000424695 1287 ntBASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 RPS8P6-201ENST00000426177 609 ntBASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 CNN2P11-201ENST00000429351 262 ntBASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 GPS2P2-201ENST00000430745 888 ntBASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 RNA5SP410-201ENST00000516285 106 ntBASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 AL691403.2-201ENST00000618460 490 ntBASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DENND1BQ6P3S1 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms