Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 FAM86C2P-203ENST00000528684 1004 ntBASIC19.48■□□□□ 0.71
RNF20Q5VTR2 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 AC008894.3-201ENST00000624324 3103 ntBASIC19.48■□□□□ 0.71
RNF20Q5VTR2 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RNF20Q5VTR2 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF20Q5VTR2 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF20Q5VTR2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RNF20Q5VTR2 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF20Q5VTR2 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF20Q5VTR2 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF20Q5VTR2 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF20Q5VTR2 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RNF20Q5VTR2 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RNF20Q5VTR2 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.47■□□□□ 0.71
RNF20Q5VTR2 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF20Q5VTR2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF20Q5VTR2 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF20Q5VTR2 AL355306.1-201ENST00000415580 579 ntBASIC19.47■□□□□ 0.71
RNF20Q5VTR2 MCCD1P2-201ENST00000423228 335 ntBASIC19.47■□□□□ 0.71
RNF20Q5VTR2 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.47■□□□□ 0.71
RNF20Q5VTR2 FAM58CP-201ENST00000435741 640 ntBASIC19.47■□□□□ 0.71
RNF20Q5VTR2 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.47■□□□□ 0.71
RNF20Q5VTR2 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF20Q5VTR2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF20Q5VTR2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.47■□□□□ 0.71
RNF20Q5VTR2 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RNF20Q5VTR2 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.47■□□□□ 0.71
RNF20Q5VTR2 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF20Q5VTR2 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF20Q5VTR2 AC008741.2-201ENST00000612792 3115 ntBASIC19.47■□□□□ 0.71
RNF20Q5VTR2 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.47■□□□□ 0.71
RNF20Q5VTR2 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.47■□□□□ 0.71
RNF20Q5VTR2 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF20Q5VTR2 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF20Q5VTR2 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.47■□□□□ 0.71
RNF20Q5VTR2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF20Q5VTR2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF20Q5VTR2 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.47■□□□□ 0.71
RNF20Q5VTR2 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.46■□□□□ 0.71
RNF20Q5VTR2 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
RNF20Q5VTR2 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF20Q5VTR2 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF20Q5VTR2 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF20Q5VTR2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF20Q5VTR2 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF20Q5VTR2 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RNF20Q5VTR2 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.46■□□□□ 0.71
RNF20Q5VTR2 CDC14C-201ENST00000428251 1719 ntBASIC19.46■□□□□ 0.71
RNF20Q5VTR2 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF20Q5VTR2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
RNF20Q5VTR2 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF20Q5VTR2 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF20Q5VTR2 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.46■□□□□ 0.71
RNF20Q5VTR2 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.46■□□□□ 0.71
RNF20Q5VTR2 AL671277.1-201ENST00000429656 993 ntBASIC19.46■□□□□ 0.71
RNF20Q5VTR2 AC245100.5-201ENST00000452108 331 ntBASIC19.46■□□□□ 0.71
RNF20Q5VTR2 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.46■□□□□ 0.71
RNF20Q5VTR2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.46■□□□□ 0.71
RNF20Q5VTR2 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF20Q5VTR2 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
RNF20Q5VTR2 LINC02447-202ENST00000501888 2146 ntBASIC19.46■□□□□ 0.71
RNF20Q5VTR2 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.46■□□□□ 0.71
RNF20Q5VTR2 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF20Q5VTR2 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF20Q5VTR2 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF20Q5VTR2 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF20Q5VTR2 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF20Q5VTR2 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF20Q5VTR2 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF20Q5VTR2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF20Q5VTR2 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.45■□□□□ 0.7
RNF20Q5VTR2 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF20Q5VTR2 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.45■□□□□ 0.7
RNF20Q5VTR2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF20Q5VTR2 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RNF20Q5VTR2 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF20Q5VTR2 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF20Q5VTR2 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF20Q5VTR2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF20Q5VTR2 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF20Q5VTR2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF20Q5VTR2 AC004832.2-201ENST00000426397 482 ntBASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms