Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
FAM78BQ5VT40 AP005117.1-202ENST00000581724 1908 ntBASIC13.03□□□□□ -0.32
FAM78BQ5VT40 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.03□□□□□ -0.32
FAM78BQ5VT40 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
FAM78BQ5VT40 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
FAM78BQ5VT40 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
FAM78BQ5VT40 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
FAM78BQ5VT40 TP73-AS1-210ENST00000637775 1455 ntBASIC13.03□□□□□ -0.32
FAM78BQ5VT40 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.03□□□□□ -0.32
FAM78BQ5VT40 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
FAM78BQ5VT40 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
FAM78BQ5VT40 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
FAM78BQ5VT40 AC138035.3-201ENST00000622706 2791 ntBASIC13.03□□□□□ -0.32
FAM78BQ5VT40 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.03□□□□□ -0.32
FAM78BQ5VT40 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
FAM78BQ5VT40 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
FAM78BQ5VT40 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
FAM78BQ5VT40 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
FAM78BQ5VT40 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.02□□□□□ -0.32
FAM78BQ5VT40 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.02□□□□□ -0.32
FAM78BQ5VT40 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
FAM78BQ5VT40 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.32
FAM78BQ5VT40 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
FAM78BQ5VT40 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
FAM78BQ5VT40 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.32
FAM78BQ5VT40 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
FAM78BQ5VT40 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
FAM78BQ5VT40 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
FAM78BQ5VT40 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
FAM78BQ5VT40 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
FAM78BQ5VT40 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
FAM78BQ5VT40 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 DRAXINP1-201ENST00000437611 948 ntBASIC13.02□□□□□ -0.33
FAM78BQ5VT40 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 LINC00265-3P-201ENST00000447588 903 ntBASIC13.02□□□□□ -0.33
FAM78BQ5VT40 RNF146-204ENST00000476956 884 ntTSL 2 BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 S100A2-206ENST00000497140 697 ntTSL 2 BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 TPSP2-201ENST00000561760 610 ntBASIC13.02□□□□□ -0.33
FAM78BQ5VT40 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 AP005901.3-202ENST00000581653 237 ntBASIC13.02□□□□□ -0.33
FAM78BQ5VT40 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 AC243591.1-201ENST00000452967 1364 ntBASIC13.02□□□□□ -0.33
FAM78BQ5VT40 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
FAM78BQ5VT40 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
FAM78BQ5VT40 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
FAM78BQ5VT40 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FAM78BQ5VT40 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.01□□□□□ -0.33
FAM78BQ5VT40 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FAM78BQ5VT40 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.01□□□□□ -0.33
FAM78BQ5VT40 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FAM78BQ5VT40 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
FAM78BQ5VT40 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FAM78BQ5VT40 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
FAM78BQ5VT40 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FAM78BQ5VT40 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FAM78BQ5VT40 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FAM78BQ5VT40 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
FAM78BQ5VT40 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FAM78BQ5VT40 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FAM78BQ5VT40 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
FAM78BQ5VT40 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
FAM78BQ5VT40 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FAM78BQ5VT40 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
FAM78BQ5VT40 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FAM78BQ5VT40 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FAM78BQ5VT40 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
FAM78BQ5VT40 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms