Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 UNC93B6-202ENST00000528242 690 ntBASIC14.22□□□□□ -0.13
ATPAF1Q5TC12 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.22□□□□□ -0.13
ATPAF1Q5TC12 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.22□□□□□ -0.13
ATPAF1Q5TC12 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.22□□□□□ -0.13
ATPAF1Q5TC12 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATPAF1Q5TC12 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ATPAF1Q5TC12 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ATPAF1Q5TC12 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.22□□□□□ -0.13
ATPAF1Q5TC12 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATPAF1Q5TC12 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATPAF1Q5TC12 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.22□□□□□ -0.13
ATPAF1Q5TC12 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.22□□□□□ -0.13
ATPAF1Q5TC12 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
ATPAF1Q5TC12 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATPAF1Q5TC12 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.22□□□□□ -0.13
ATPAF1Q5TC12 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATPAF1Q5TC12 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.21□□□□□ -0.13
ATPAF1Q5TC12 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATPAF1Q5TC12 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ATPAF1Q5TC12 AC022532.1-201ENST00000624563 1728 ntBASIC14.21□□□□□ -0.13
ATPAF1Q5TC12 NORAD-201ENST00000565493 5339 ntBASIC14.21□□□□□ -0.13
ATPAF1Q5TC12 AC129492.6-201ENST00000611383 1305 ntBASIC14.21□□□□□ -0.13
ATPAF1Q5TC12 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ATPAF1Q5TC12 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.21□□□□□ -0.13
ATPAF1Q5TC12 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
ATPAF1Q5TC12 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATPAF1Q5TC12 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
ATPAF1Q5TC12 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ATPAF1Q5TC12 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
ATPAF1Q5TC12 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ATPAF1Q5TC12 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ATPAF1Q5TC12 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
ATPAF1Q5TC12 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATPAF1Q5TC12 MRPL20P1-201ENST00000400819 433 ntBASIC14.21□□□□□ -0.13
ATPAF1Q5TC12 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.21□□□□□ -0.13
ATPAF1Q5TC12 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.21□□□□□ -0.13
ATPAF1Q5TC12 AC079776.4-201ENST00000511039 504 ntBASIC14.21□□□□□ -0.13
ATPAF1Q5TC12 RNA5SP415-201ENST00000517246 115 ntBASIC14.21□□□□□ -0.13
ATPAF1Q5TC12 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.21□□□□□ -0.13
ATPAF1Q5TC12 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.21□□□□□ -0.13
ATPAF1Q5TC12 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.21□□□□□ -0.13
ATPAF1Q5TC12 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.21□□□□□ -0.13
ATPAF1Q5TC12 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.21□□□□□ -0.13
ATPAF1Q5TC12 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
ATPAF1Q5TC12 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATPAF1Q5TC12 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.21□□□□□ -0.13
ATPAF1Q5TC12 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATPAF1Q5TC12 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ATPAF1Q5TC12 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
ATPAF1Q5TC12 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ATPAF1Q5TC12 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ATPAF1Q5TC12 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.21□□□□□ -0.14
ATPAF1Q5TC12 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
ATPAF1Q5TC12 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.21□□□□□ -0.14
ATPAF1Q5TC12 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ATPAF1Q5TC12 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.21□□□□□ -0.14
ATPAF1Q5TC12 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
ATPAF1Q5TC12 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.21□□□□□ -0.14
ATPAF1Q5TC12 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
ATPAF1Q5TC12 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
ATPAF1Q5TC12 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
ATPAF1Q5TC12 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
ATPAF1Q5TC12 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
ATPAF1Q5TC12 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
ATPAF1Q5TC12 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 IL9RP2-201ENST00000423948 1312 ntBASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 AC009947.1-201ENST00000444350 727 ntBASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 AC108073.2-201ENST00000464002 357 ntBASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 AC108751.1-201ENST00000490852 363 ntBASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms