Protein–RNA interactions for Protein: Q52LD8

RFTN2, Raftlin-2, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN2Q52LD8 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFTN2Q52LD8 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.7■□□□□ 0.1
RFTN2Q52LD8 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFTN2Q52LD8 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFTN2Q52LD8 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.7■□□□□ 0.1
RFTN2Q52LD8 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFTN2Q52LD8 AC092919.2-201ENST00000623631 1645 ntBASIC15.7■□□□□ 0.1
RFTN2Q52LD8 AC004870.1-201ENST00000315132 882 ntBASIC15.7■□□□□ 0.1
RFTN2Q52LD8 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.7■□□□□ 0.1
RFTN2Q52LD8 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.7■□□□□ 0.1
RFTN2Q52LD8 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.7■□□□□ 0.1
RFTN2Q52LD8 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.7■□□□□ 0.1
RFTN2Q52LD8 AC009947.1-201ENST00000444350 727 ntBASIC15.7■□□□□ 0.1
RFTN2Q52LD8 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.7■□□□□ 0.1
RFTN2Q52LD8 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.7■□□□□ 0.1
RFTN2Q52LD8 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.7■□□□□ 0.1
RFTN2Q52LD8 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.7■□□□□ 0.1
RFTN2Q52LD8 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.7■□□□□ 0.1
RFTN2Q52LD8 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFTN2Q52LD8 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFTN2Q52LD8 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
RFTN2Q52LD8 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFTN2Q52LD8 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.7■□□□□ 0.1
RFTN2Q52LD8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFTN2Q52LD8 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFTN2Q52LD8 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RFTN2Q52LD8 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.7■□□□□ 0.1
RFTN2Q52LD8 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.7■□□□□ 0.1
RFTN2Q52LD8 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.7■□□□□ 0.1
RFTN2Q52LD8 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFTN2Q52LD8 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFTN2Q52LD8 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 RNA5SP419-201ENST00000515908 135 ntBASIC15.69■□□□□ 0.1
RFTN2Q52LD8 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFTN2Q52LD8 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RFTN2Q52LD8 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RFTN2Q52LD8 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.68■□□□□ 0.1
RFTN2Q52LD8 AC104640.1-201ENST00000562617 2109 ntBASIC15.68■□□□□ 0.1
RFTN2Q52LD8 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RFTN2Q52LD8 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFTN2Q52LD8 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RFTN2Q52LD8 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFTN2Q52LD8 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFTN2Q52LD8 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RFTN2Q52LD8 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFTN2Q52LD8 AC011270.2-201ENST00000624293 2550 ntBASIC15.68■□□□□ 0.1
RFTN2Q52LD8 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.68■□□□□ 0.1
RFTN2Q52LD8 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFTN2Q52LD8 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RFTN2Q52LD8 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFTN2Q52LD8 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFTN2Q52LD8 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.68■□□□□ 0.1
RFTN2Q52LD8 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.68■□□□□ 0.1
RFTN2Q52LD8 AC008677.1-201ENST00000519230 1561 ntBASIC15.68■□□□□ 0.1
RFTN2Q52LD8 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFTN2Q52LD8 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms