Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 SIGLEC16-201ENST00000599858 1437 ntBASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 AL353135.1-201ENST00000606729 504 ntBASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 PGM5P2-202ENST00000637225 1043 ntBASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.59□□□□□ -0.23
ANKRD55Q3KP44 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
ANKRD55Q3KP44 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
ANKRD55Q3KP44 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.58□□□□□ -0.23
ANKRD55Q3KP44 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.58□□□□□ -0.23
ANKRD55Q3KP44 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 ATP5G2P1-201ENST00000433580 426 ntBASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 ABR-204ENST00000543210 1049 ntTSL 2 BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 ABR-217ENST00000572441 563 ntTSL 4 BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 AC092329.2-201ENST00000598402 547 ntBASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 KRT18P1-202ENST00000452408 1331 ntBASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ANKRD55Q3KP44 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms