Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HIST3H3Q16695 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST3H3Q16695 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST3H3Q16695 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST3H3Q16695 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST3H3Q16695 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.36□□□□□ -0.11
HIST3H3Q16695 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.36□□□□□ -0.11
HIST3H3Q16695 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.36□□□□□ -0.11
HIST3H3Q16695 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.36□□□□□ -0.11
HIST3H3Q16695 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.36□□□□□ -0.11
HIST3H3Q16695 CEND1P1-201ENST00000451006 455 ntBASIC14.36□□□□□ -0.11
HIST3H3Q16695 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.36□□□□□ -0.11
HIST3H3Q16695 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.36□□□□□ -0.11
HIST3H3Q16695 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.36□□□□□ -0.11
HIST3H3Q16695 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.36□□□□□ -0.11
HIST3H3Q16695 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.36□□□□□ -0.11
HIST3H3Q16695 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HIST3H3Q16695 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST3H3Q16695 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HIST3H3Q16695 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST3H3Q16695 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST3H3Q16695 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HIST3H3Q16695 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.36□□□□□ -0.11
HIST3H3Q16695 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.36□□□□□ -0.11
HIST3H3Q16695 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.36□□□□□ -0.11
HIST3H3Q16695 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST3H3Q16695 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.36□□□□□ -0.11
HIST3H3Q16695 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.36□□□□□ -0.11
HIST3H3Q16695 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST3H3Q16695 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HIST3H3Q16695 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST3H3Q16695 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST3H3Q16695 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST3H3Q16695 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIST3H3Q16695 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIST3H3Q16695 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIST3H3Q16695 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST3H3Q16695 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST3H3Q16695 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST3H3Q16695 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST3H3Q16695 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST3H3Q16695 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST3H3Q16695 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 RPSAP43-201ENST00000402237 625 ntBASIC14.35□□□□□ -0.11
HIST3H3Q16695 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 TIMM8BP1-201ENST00000452384 211 ntBASIC14.35□□□□□ -0.11
HIST3H3Q16695 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 AC069335.1-201ENST00000489972 472 ntBASIC14.35□□□□□ -0.11
HIST3H3Q16695 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIST3H3Q16695 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 AC022145.2-201ENST00000598203 171 ntBASIC14.35□□□□□ -0.11
HIST3H3Q16695 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIST3H3Q16695 AL513210.1-201ENST00000629608 234 ntBASIC14.35□□□□□ -0.11
HIST3H3Q16695 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIST3H3Q16695 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIST3H3Q16695 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST3H3Q16695 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST3H3Q16695 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIST3H3Q16695 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
HIST3H3Q16695 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
HIST3H3Q16695 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST3H3Q16695 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST3H3Q16695 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST3H3Q16695 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.34□□□□□ -0.11
HIST3H3Q16695 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST3H3Q16695 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST3H3Q16695 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST3H3Q16695 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms