Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH17Q12864 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDH17Q12864 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH17Q12864 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.48■□□□□ 0.23
CDH17Q12864 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH17Q12864 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH17Q12864 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDH17Q12864 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CDH17Q12864 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH17Q12864 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDH17Q12864 PAUPAR-201ENST00000630360 2965 ntBASIC16.47■□□□□ 0.23
CDH17Q12864 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CDH17Q12864 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH17Q12864 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH17Q12864 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH17Q12864 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH17Q12864 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH17Q12864 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CDH17Q12864 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CDH17Q12864 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CDH17Q12864 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH17Q12864 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH17Q12864 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDH17Q12864 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDH17Q12864 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDH17Q12864 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CDH17Q12864 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH17Q12864 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.47■□□□□ 0.23
CDH17Q12864 RARRES2P8-201ENST00000566335 367 ntBASIC16.47■□□□□ 0.23
CDH17Q12864 AC002347.1-201ENST00000569543 541 ntBASIC16.47■□□□□ 0.23
CDH17Q12864 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH17Q12864 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH17Q12864 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH17Q12864 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH17Q12864 CICP6-201ENST00000457191 2729 ntBASIC16.47■□□□□ 0.23
CDH17Q12864 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH17Q12864 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH17Q12864 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CDH17Q12864 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDH17Q12864 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH17Q12864 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CDH17Q12864 AC046158.3-201ENST00000624947 2558 ntBASIC16.47■□□□□ 0.23
CDH17Q12864 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH17Q12864 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CDH17Q12864 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.47■□□□□ 0.23
CDH17Q12864 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH17Q12864 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH17Q12864 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH17Q12864 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH17Q12864 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
CDH17Q12864 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH17Q12864 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH17Q12864 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.47■□□□□ 0.23
CDH17Q12864 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDH17Q12864 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.47■□□□□ 0.23
CDH17Q12864 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH17Q12864 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDH17Q12864 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.46■□□□□ 0.23
CDH17Q12864 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH17Q12864 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.46■□□□□ 0.23
CDH17Q12864 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
CDH17Q12864 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH17Q12864 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH17Q12864 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CDH17Q12864 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH17Q12864 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CDH17Q12864 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CDH17Q12864 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH17Q12864 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH17Q12864 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH17Q12864 HAUS4P1-201ENST00000406739 1145 ntBASIC16.46■□□□□ 0.23
CDH17Q12864 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.46■□□□□ 0.23
CDH17Q12864 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH17Q12864 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.46■□□□□ 0.23
CDH17Q12864 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH17Q12864 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH17Q12864 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH17Q12864 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.46■□□□□ 0.23
CDH17Q12864 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH17Q12864 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH17Q12864 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
CDH17Q12864 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH17Q12864 AC008677.1-201ENST00000519230 1561 ntBASIC16.46■□□□□ 0.23
CDH17Q12864 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH17Q12864 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.46■□□□□ 0.22
CDH17Q12864 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH17Q12864 AL139384.1-201ENST00000612143 3047 ntBASIC16.45■□□□□ 0.22
CDH17Q12864 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CDH17Q12864 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH17Q12864 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH17Q12864 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH17Q12864 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.45■□□□□ 0.22
CDH17Q12864 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH17Q12864 AC132872.4-202ENST00000622924 2756 ntBASIC16.45■□□□□ 0.22
CDH17Q12864 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH17Q12864 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH17Q12864 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH17Q12864 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH17Q12864 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH17Q12864 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms