Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
NKX6-1P78426 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-1P78426 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
NKX6-1P78426 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-1P78426 HYMAI-201ENST00000635591 3347 ntBASIC14.43□□□□□ -0.1
NKX6-1P78426 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-1P78426 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-1P78426 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-1P78426 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.43□□□□□ -0.1
NKX6-1P78426 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-1P78426 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-1P78426 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-1P78426 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.43□□□□□ -0.1
NKX6-1P78426 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.43□□□□□ -0.1
NKX6-1P78426 RBPMS2P1-201ENST00000437762 623 ntBASIC14.43□□□□□ -0.1
NKX6-1P78426 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.43□□□□□ -0.1
NKX6-1P78426 FAM207CP-201ENST00000443486 507 ntBASIC14.43□□□□□ -0.1
NKX6-1P78426 GAPDHP21-201ENST00000450301 1010 ntBASIC14.43□□□□□ -0.1
NKX6-1P78426 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-1P78426 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.43□□□□□ -0.1
NKX6-1P78426 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.43□□□□□ -0.1
NKX6-1P78426 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.43□□□□□ -0.1
NKX6-1P78426 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.43□□□□□ -0.1
NKX6-1P78426 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-1P78426 LINC02560-201ENST00000596379 459 ntBASIC14.43□□□□□ -0.1
NKX6-1P78426 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.43□□□□□ -0.1
NKX6-1P78426 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.43□□□□□ -0.1
NKX6-1P78426 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-1P78426 AC006277.1-201ENST00000624348 1610 ntBASIC14.43□□□□□ -0.1
NKX6-1P78426 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-1P78426 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
NKX6-1P78426 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-1P78426 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
NKX6-1P78426 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.43□□□□□ -0.1
NKX6-1P78426 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
NKX6-1P78426 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-1P78426 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.43□□□□□ -0.1
NKX6-1P78426 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-1P78426 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-1P78426 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-1P78426 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.43□□□□□ -0.1
NKX6-1P78426 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-1P78426 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-1P78426 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-1P78426 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.42□□□□□ -0.1
NKX6-1P78426 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.42□□□□□ -0.1
NKX6-1P78426 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
NKX6-1P78426 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-1P78426 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-1P78426 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-1P78426 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-1P78426 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-1P78426 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.42□□□□□ -0.1
NKX6-1P78426 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-1P78426 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-1P78426 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.42□□□□□ -0.1
NKX6-1P78426 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-1P78426 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.42□□□□□ -0.1
NKX6-1P78426 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-1P78426 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-1P78426 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-1P78426 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.42□□□□□ -0.1
NKX6-1P78426 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.42□□□□□ -0.1
NKX6-1P78426 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.42□□□□□ -0.1
NKX6-1P78426 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.42□□□□□ -0.1
NKX6-1P78426 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.42□□□□□ -0.1
NKX6-1P78426 IGHV3-62-201ENST00000520057 340 ntBASIC14.42□□□□□ -0.1
NKX6-1P78426 AP002490.2-201ENST00000524791 560 ntBASIC14.42□□□□□ -0.1
NKX6-1P78426 SLC25A39P2-201ENST00000537614 270 ntBASIC14.42□□□□□ -0.1
NKX6-1P78426 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-1P78426 AL031055.1-201ENST00000606362 631 ntBASIC14.42□□□□□ -0.1
NKX6-1P78426 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.42□□□□□ -0.1
NKX6-1P78426 AL390754.1-201ENST00000619088 582 ntBASIC14.42□□□□□ -0.1
NKX6-1P78426 AC008761.3-201ENST00000624803 892 ntBASIC14.42□□□□□ -0.1
NKX6-1P78426 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.42□□□□□ -0.1
NKX6-1P78426 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-1P78426 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-1P78426 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-1P78426 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-1P78426 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-1P78426 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-1P78426 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-1P78426 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.42□□□□□ -0.1
NKX6-1P78426 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-1P78426 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-1P78426 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-1P78426 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-1P78426 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-1P78426 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-1P78426 PCDHA1-201ENST00000378133 2726 ntBASIC14.42□□□□□ -0.1
NKX6-1P78426 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
NKX6-1P78426 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-1P78426 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.42□□□□□ -0.1
NKX6-1P78426 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-1P78426 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-1P78426 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-1P78426 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.41□□□□□ -0.1
NKX6-1P78426 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.41□□□□□ -0.1
NKX6-1P78426 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.41□□□□□ -0.1
NKX6-1P78426 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms