Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.06□□□□□ -0.16
AP3S2P59780 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S2P59780 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S2P59780 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
AP3S2P59780 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.06□□□□□ -0.16
AP3S2P59780 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S2P59780 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.06□□□□□ -0.16
AP3S2P59780 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
AP3S2P59780 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.06□□□□□ -0.16
AP3S2P59780 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
AP3S2P59780 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.05□□□□□ -0.16
AP3S2P59780 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.05□□□□□ -0.16
AP3S2P59780 Z83836.1-201ENST00000624605 1642 ntBASIC14.05□□□□□ -0.16
AP3S2P59780 AC023908.3-201ENST00000564211 3047 ntBASIC14.05□□□□□ -0.16
AP3S2P59780 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S2P59780 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
AP3S2P59780 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.05□□□□□ -0.16
AP3S2P59780 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
AP3S2P59780 ST20-AS1-201ENST00000560255 4223 ntBASIC14.05□□□□□ -0.16
AP3S2P59780 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S2P59780 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S2P59780 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.05□□□□□ -0.16
AP3S2P59780 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S2P59780 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
AP3S2P59780 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S2P59780 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
AP3S2P59780 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.05□□□□□ -0.16
AP3S2P59780 AC098590.1-201ENST00000468126 897 ntBASIC14.05□□□□□ -0.16
AP3S2P59780 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S2P59780 AC142381.4-202ENST00000563973 229 ntBASIC14.05□□□□□ -0.16
AP3S2P59780 TERC-201ENST00000602385 541 ntBASIC14.05□□□□□ -0.16
AP3S2P59780 AL023973.1-201ENST00000624619 620 ntBASIC14.05□□□□□ -0.16
AP3S2P59780 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S2P59780 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S2P59780 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S2P59780 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.05□□□□□ -0.16
AP3S2P59780 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
AP3S2P59780 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
AP3S2P59780 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S2P59780 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.05□□□□□ -0.16
AP3S2P59780 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
AP3S2P59780 AC243591.1-201ENST00000452967 1364 ntBASIC14.05□□□□□ -0.16
AP3S2P59780 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S2P59780 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.05□□□□□ -0.16
AP3S2P59780 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S2P59780 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S2P59780 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S2P59780 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
AP3S2P59780 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.05□□□□□ -0.16
AP3S2P59780 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S2P59780 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.04□□□□□ -0.16
AP3S2P59780 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S2P59780 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.04□□□□□ -0.16
AP3S2P59780 SNX18-202ENST00000343017 3140 ntBASIC14.04□□□□□ -0.16
AP3S2P59780 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.04□□□□□ -0.16
AP3S2P59780 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S2P59780 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S2P59780 AC106881.1-201ENST00000605849 3329 ntBASIC14.04□□□□□ -0.16
AP3S2P59780 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.04□□□□□ -0.16
AP3S2P59780 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S2P59780 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S2P59780 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S2P59780 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S2P59780 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S2P59780 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S2P59780 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.04□□□□□ -0.16
AP3S2P59780 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.04□□□□□ -0.16
AP3S2P59780 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.04□□□□□ -0.16
AP3S2P59780 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.04□□□□□ -0.16
AP3S2P59780 AC009533.2-201ENST00000543664 586 ntBASIC14.04□□□□□ -0.16
AP3S2P59780 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.04□□□□□ -0.16
AP3S2P59780 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S2P59780 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S2P59780 AC010947.1-201ENST00000623454 693 ntBASIC14.04□□□□□ -0.16
AP3S2P59780 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.04□□□□□ -0.16
AP3S2P59780 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S2P59780 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S2P59780 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S2P59780 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
AP3S2P59780 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S2P59780 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S2P59780 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S2P59780 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S2P59780 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S2P59780 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.04□□□□□ -0.16
AP3S2P59780 CYP2D8P-201ENST00000433633 1490 ntBASIC14.04□□□□□ -0.16
AP3S2P59780 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S2P59780 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.04□□□□□ -0.16
AP3S2P59780 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S2P59780 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S2P59780 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
AP3S2P59780 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S2P59780 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
AP3S2P59780 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S2P59780 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S2P59780 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S2P59780 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.04□□□□□ -0.16
AP3S2P59780 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S2P59780 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
AP3S2P59780 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms