Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.67■□□□□ 0.58
CHMP4BP1P59074 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 AL021920.2-201ENST00000624828 1351 ntBASIC18.67■□□□□ 0.58
CHMP4BP1P59074 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP4BP1P59074 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP4BP1P59074 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP4BP1P59074 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP4BP1P59074 LINC00554-201ENST00000564841 3011 ntBASIC18.66■□□□□ 0.58
CHMP4BP1P59074 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP4BP1P59074 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP4BP1P59074 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CHMP4BP1P59074 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP4BP1P59074 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
CHMP4BP1P59074 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP4BP1P59074 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP4BP1P59074 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.66■□□□□ 0.58
CHMP4BP1P59074 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP4BP1P59074 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.66■□□□□ 0.58
CHMP4BP1P59074 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.66■□□□□ 0.58
CHMP4BP1P59074 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.66■□□□□ 0.58
CHMP4BP1P59074 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.66■□□□□ 0.58
CHMP4BP1P59074 AC190387.1-201ENST00000551683 408 ntBASIC18.66■□□□□ 0.58
CHMP4BP1P59074 AC003101.2-201ENST00000612557 442 ntBASIC18.66■□□□□ 0.58
CHMP4BP1P59074 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.66■□□□□ 0.58
CHMP4BP1P59074 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CHMP4BP1P59074 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP4BP1P59074 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP4BP1P59074 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.66■□□□□ 0.58
CHMP4BP1P59074 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP4BP1P59074 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.66■□□□□ 0.58
CHMP4BP1P59074 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP4BP1P59074 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.66■□□□□ 0.58
CHMP4BP1P59074 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.66■□□□□ 0.58
CHMP4BP1P59074 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP4BP1P59074 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP4BP1P59074 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP4BP1P59074 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 FER1L4-210ENST00000615531 5998 ntBASIC18.65■□□□□ 0.58
CHMP4BP1P59074 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 AC015922.1-201ENST00000421102 1152 ntBASIC18.65■□□□□ 0.58
CHMP4BP1P59074 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 CYP2A7P1-201ENST00000595391 815 ntBASIC18.65■□□□□ 0.58
CHMP4BP1P59074 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP4BP1P59074 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHMP4BP1P59074 FRMD8P1-201ENST00000440433 1524 ntBASIC18.64■□□□□ 0.58
CHMP4BP1P59074 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.58
CHMP4BP1P59074 RNF216P1-203ENST00000404404 2427 ntBASIC18.64■□□□□ 0.58
CHMP4BP1P59074 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHMP4BP1P59074 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHMP4BP1P59074 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHMP4BP1P59074 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.64■□□□□ 0.57
CHMP4BP1P59074 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP4BP1P59074 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms