Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.99□□□□□ -0.01
CLDN20P56880 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
CLDN20P56880 AC092364.2-201ENST00000596710 2692 ntBASIC14.99□□□□□ -0.01
CLDN20P56880 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN20P56880 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN20P56880 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.99□□□□□ -0.01
CLDN20P56880 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.99□□□□□ -0.01
CLDN20P56880 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.99□□□□□ -0.01
CLDN20P56880 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.99□□□□□ -0.01
CLDN20P56880 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CLDN20P56880 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.99□□□□□ -0.01
CLDN20P56880 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.99□□□□□ -0.01
CLDN20P56880 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN20P56880 AL161645.1-201ENST00000622716 1255 ntBASIC14.99□□□□□ -0.01
CLDN20P56880 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.99□□□□□ -0.01
CLDN20P56880 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN20P56880 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.99□□□□□ -0.01
CLDN20P56880 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN20P56880 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN20P56880 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.99□□□□□ -0.01
CLDN20P56880 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.99□□□□□ -0.01
CLDN20P56880 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.99□□□□□ -0.01
CLDN20P56880 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.99□□□□□ -0.01
CLDN20P56880 KRT8P39-201ENST00000396270 1433 ntBASIC14.99□□□□□ -0.01
CLDN20P56880 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN20P56880 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN20P56880 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN20P56880 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.99□□□□□ -0.01
CLDN20P56880 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN20P56880 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN20P56880 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.99□□□□□ -0.01
CLDN20P56880 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.99□□□□□ -0.01
CLDN20P56880 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.99□□□□□ -0.01
CLDN20P56880 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
CLDN20P56880 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN20P56880 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CLDN20P56880 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN20P56880 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN20P56880 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN20P56880 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CLDN20P56880 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN20P56880 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
CLDN20P56880 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN20P56880 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN20P56880 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN20P56880 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
CLDN20P56880 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN20P56880 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN20P56880 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN20P56880 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN20P56880 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN20P56880 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN20P56880 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CLDN20P56880 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN20P56880 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
CLDN20P56880 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN20P56880 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN20P56880 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN20P56880 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN20P56880 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.98□□□□□ -0.01
CLDN20P56880 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN20P56880 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN20P56880 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.98□□□□□ -0.01
CLDN20P56880 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN20P56880 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CLDN20P56880 TIMM8BP1-201ENST00000452384 211 ntBASIC14.98□□□□□ -0.01
CLDN20P56880 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN20P56880 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.98□□□□□ -0.01
CLDN20P56880 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.98□□□□□ -0.01
CLDN20P56880 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.98□□□□□ -0.01
CLDN20P56880 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CLDN20P56880 RARRES2P8-201ENST00000566335 367 ntBASIC14.98□□□□□ -0.01
CLDN20P56880 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN20P56880 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.98□□□□□ -0.01
CLDN20P56880 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN20P56880 AP001160.2-201ENST00000596071 487 ntBASIC14.98□□□□□ -0.01
CLDN20P56880 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.98□□□□□ -0.01
CLDN20P56880 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.98□□□□□ -0.01
CLDN20P56880 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN20P56880 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN20P56880 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN20P56880 AC079781.4-201ENST00000641908 219 ntBASIC14.98□□□□□ -0.01
CLDN20P56880 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN20P56880 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN20P56880 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CLDN20P56880 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN20P56880 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.98□□□□□ -0.01
CLDN20P56880 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN20P56880 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN20P56880 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN20P56880 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CLDN20P56880 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN20P56880 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN20P56880 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN20P56880 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN20P56880 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN20P56880 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CLDN20P56880 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN20P56880 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN20P56880 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms