Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH15P55291 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
CDH15P55291 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDH15P55291 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH15P55291 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH15P55291 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDH15P55291 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CDH15P55291 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH15P55291 AC068587.6-202ENST00000641839 5619 ntBASIC15.29■□□□□ 0.04
CDH15P55291 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDH15P55291 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH15P55291 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH15P55291 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH15P55291 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.28■□□□□ 0.04
CDH15P55291 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CDH15P55291 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH15P55291 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH15P55291 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH15P55291 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH15P55291 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH15P55291 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH15P55291 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH15P55291 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH15P55291 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH15P55291 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH15P55291 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH15P55291 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH15P55291 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH15P55291 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CDH15P55291 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH15P55291 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CDH15P55291 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH15P55291 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH15P55291 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH15P55291 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
CDH15P55291 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
CDH15P55291 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH15P55291 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH15P55291 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH15P55291 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.28■□□□□ 0.04
CDH15P55291 TSPY19P-201ENST00000418461 509 ntBASIC15.28■□□□□ 0.04
CDH15P55291 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH15P55291 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.28■□□□□ 0.04
CDH15P55291 TSPY18P-201ENST00000441642 509 ntBASIC15.28■□□□□ 0.04
CDH15P55291 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.28■□□□□ 0.04
CDH15P55291 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH15P55291 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.28■□□□□ 0.04
CDH15P55291 IGHV3-41-201ENST00000613121 348 ntBASIC15.28■□□□□ 0.04
CDH15P55291 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CDH15P55291 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CDH15P55291 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH15P55291 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH15P55291 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH15P55291 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH15P55291 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH15P55291 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CDH15P55291 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDH15P55291 AC007686.3-201ENST00000619017 3487 ntBASIC15.28■□□□□ 0.04
CDH15P55291 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH15P55291 AC069224.1-201ENST00000566372 1715 ntBASIC15.28■□□□□ 0.04
CDH15P55291 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CDH15P55291 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH15P55291 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH15P55291 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH15P55291 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
CDH15P55291 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDH15P55291 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH15P55291 AL049757.1-201ENST00000616842 1596 ntBASIC15.28■□□□□ 0.04
CDH15P55291 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH15P55291 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CDH15P55291 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
CDH15P55291 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.27■□□□□ 0.04
CDH15P55291 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH15P55291 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH15P55291 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH15P55291 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CDH15P55291 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.27■□□□□ 0.04
CDH15P55291 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH15P55291 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CDH15P55291 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH15P55291 AC007292.2-201ENST00000593524 1812 ntBASIC15.27■□□□□ 0.04
CDH15P55291 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH15P55291 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH15P55291 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CDH15P55291 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.27■□□□□ 0.04
CDH15P55291 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CDH15P55291 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH15P55291 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH15P55291 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CDH15P55291 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH15P55291 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH15P55291 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CDH15P55291 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CDH15P55291 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CDH15P55291 KRT17P6-201ENST00000453795 1220 ntBASIC15.27■□□□□ 0.04
CDH15P55291 VENTXP7-201ENST00000475503 772 ntBASIC15.27■□□□□ 0.04
CDH15P55291 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH15P55291 AC104819.1-201ENST00000504587 486 ntBASIC15.27■□□□□ 0.04
CDH15P55291 GUSBP12-201ENST00000513727 720 ntBASIC15.27■□□□□ 0.04
CDH15P55291 AC091304.2-201ENST00000564639 760 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms