Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NR1H2P55055 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.54■□□□□ 0.08
NR1H2P55055 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NR1H2P55055 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NR1H2P55055 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NR1H2P55055 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NR1H2P55055 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NR1H2P55055 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NR1H2P55055 RPS2P28-201ENST00000314255 741 ntBASIC15.54■□□□□ 0.08
NR1H2P55055 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NR1H2P55055 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.54■□□□□ 0.08
NR1H2P55055 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
NR1H2P55055 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.54■□□□□ 0.08
NR1H2P55055 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
NR1H2P55055 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.54■□□□□ 0.08
NR1H2P55055 AC011467.2-201ENST00000598425 242 ntBASIC15.54■□□□□ 0.08
NR1H2P55055 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
NR1H2P55055 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.54■□□□□ 0.08
NR1H2P55055 AL355877.3-201ENST00000622820 899 ntBASIC15.54■□□□□ 0.08
NR1H2P55055 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NR1H2P55055 CICP24-201ENST00000605464 2705 ntBASIC15.54■□□□□ 0.08
NR1H2P55055 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
NR1H2P55055 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NR1H2P55055 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NR1H2P55055 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NR1H2P55055 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.54■□□□□ 0.08
NR1H2P55055 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NR1H2P55055 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NR1H2P55055 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
NR1H2P55055 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NR1H2P55055 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
NR1H2P55055 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.54■□□□□ 0.08
NR1H2P55055 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NR1H2P55055 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NR1H2P55055 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NR1H2P55055 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.53■□□□□ 0.08
NR1H2P55055 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NR1H2P55055 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NR1H2P55055 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.53■□□□□ 0.08
NR1H2P55055 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.53■□□□□ 0.08
NR1H2P55055 AC125634.1-201ENST00000438758 1403 ntBASIC15.53■□□□□ 0.08
NR1H2P55055 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NR1H2P55055 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NR1H2P55055 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
NR1H2P55055 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NR1H2P55055 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NR1H2P55055 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NR1H2P55055 AL590627.1-203ENST00000421194 1026 ntBASIC15.53■□□□□ 0.08
NR1H2P55055 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.53■□□□□ 0.08
NR1H2P55055 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.53■□□□□ 0.08
NR1H2P55055 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.53■□□□□ 0.08
NR1H2P55055 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.53■□□□□ 0.08
NR1H2P55055 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.53■□□□□ 0.08
NR1H2P55055 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
NR1H2P55055 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NR1H2P55055 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NR1H2P55055 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.53■□□□□ 0.08
NR1H2P55055 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.53■□□□□ 0.08
NR1H2P55055 TP73-AS1-207ENST00000624167 988 ntBASIC15.53■□□□□ 0.08
NR1H2P55055 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
NR1H2P55055 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NR1H2P55055 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NR1H2P55055 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.53■□□□□ 0.08
NR1H2P55055 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NR1H2P55055 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NR1H2P55055 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NR1H2P55055 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
NR1H2P55055 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.53■□□□□ 0.08
NR1H2P55055 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NR1H2P55055 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NR1H2P55055 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NR1H2P55055 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NR1H2P55055 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NR1H2P55055 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
NR1H2P55055 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NR1H2P55055 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.53■□□□□ 0.08
NR1H2P55055 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NR1H2P55055 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.53■□□□□ 0.08
NR1H2P55055 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NR1H2P55055 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NR1H2P55055 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.52■□□□□ 0.08
NR1H2P55055 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NR1H2P55055 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NR1H2P55055 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NR1H2P55055 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NR1H2P55055 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.52■□□□□ 0.08
NR1H2P55055 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NR1H2P55055 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.52■□□□□ 0.08
NR1H2P55055 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NR1H2P55055 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
NR1H2P55055 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NR1H2P55055 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
NR1H2P55055 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
NR1H2P55055 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NR1H2P55055 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.52■□□□□ 0.08
NR1H2P55055 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.52■□□□□ 0.08
NR1H2P55055 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.52■□□□□ 0.08
NR1H2P55055 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
NR1H2P55055 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.52■□□□□ 0.08
NR1H2P55055 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms