Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 CXCL1P1-201ENST00000502804 216 ntBASIC14.87□□□□□ -0.03
HMGA2P52926 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.87□□□□□ -0.03
HMGA2P52926 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.87□□□□□ -0.03
HMGA2P52926 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.87□□□□□ -0.03
HMGA2P52926 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HMGA2P52926 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HMGA2P52926 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HMGA2P52926 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGA2P52926 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HMGA2P52926 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGA2P52926 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
HMGA2P52926 AP001282.1-201ENST00000531301 1499 ntBASIC14.87□□□□□ -0.03
HMGA2P52926 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HMGA2P52926 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGA2P52926 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGA2P52926 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGA2P52926 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HMGA2P52926 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
HMGA2P52926 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.87□□□□□ -0.03
HMGA2P52926 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.87□□□□□ -0.03
HMGA2P52926 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
HMGA2P52926 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGA2P52926 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.87□□□□□ -0.03
HMGA2P52926 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HMGA2P52926 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HMGA2P52926 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HMGA2P52926 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HMGA2P52926 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGA2P52926 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.86□□□□□ -0.03
HMGA2P52926 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGA2P52926 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGA2P52926 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
HMGA2P52926 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGA2P52926 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGA2P52926 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
HMGA2P52926 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGA2P52926 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HMGA2P52926 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.86□□□□□ -0.03
HMGA2P52926 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGA2P52926 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGA2P52926 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.86□□□□□ -0.03
HMGA2P52926 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGA2P52926 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGA2P52926 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
HMGA2P52926 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGA2P52926 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HMGA2P52926 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGA2P52926 AC108073.2-201ENST00000464002 357 ntBASIC14.86□□□□□ -0.03
HMGA2P52926 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HMGA2P52926 RNPS1P1-201ENST00000507437 918 ntBASIC14.86□□□□□ -0.03
HMGA2P52926 KRT18P35-201ENST00000510488 1269 ntBASIC14.86□□□□□ -0.03
HMGA2P52926 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.86□□□□□ -0.03
HMGA2P52926 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HMGA2P52926 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGA2P52926 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGA2P52926 CLEC4GP1-201ENST00000596555 870 ntBASIC14.86□□□□□ -0.03
HMGA2P52926 LINC01711-201ENST00000598340 967 ntBASIC14.86□□□□□ -0.03
HMGA2P52926 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGA2P52926 TP73-AS1-207ENST00000624167 988 ntBASIC14.86□□□□□ -0.03
HMGA2P52926 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGA2P52926 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGA2P52926 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGA2P52926 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.86□□□□□ -0.03
HMGA2P52926 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HMGA2P52926 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGA2P52926 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGA2P52926 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGA2P52926 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.86□□□□□ -0.03
HMGA2P52926 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGA2P52926 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGA2P52926 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
HMGA2P52926 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGA2P52926 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGA2P52926 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGA2P52926 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.85□□□□□ -0.03
HMGA2P52926 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGA2P52926 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
HMGA2P52926 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGA2P52926 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGA2P52926 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGA2P52926 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.85□□□□□ -0.03
HMGA2P52926 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
HMGA2P52926 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGA2P52926 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HMGA2P52926 AP003680.1-201ENST00000598970 3660 ntBASIC14.85□□□□□ -0.03
HMGA2P52926 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.85□□□□□ -0.03
HMGA2P52926 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGA2P52926 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGA2P52926 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGA2P52926 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGA2P52926 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGA2P52926 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGA2P52926 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGA2P52926 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.85□□□□□ -0.03
HMGA2P52926 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HMGA2P52926 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.85□□□□□ -0.03
HMGA2P52926 AC109635.5-201ENST00000533593 962 ntBASIC14.85□□□□□ -0.03
HMGA2P52926 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HMGA2P52926 MIR4321-201ENST00000592276 80 ntBASIC14.85□□□□□ -0.03
HMGA2P52926 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms