Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPT1AP50416 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPT1AP50416 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPT1AP50416 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.9■□□□□ 0.46
CPT1AP50416 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPT1AP50416 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CPT1AP50416 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.9■□□□□ 0.46
CPT1AP50416 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CPT1AP50416 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPT1AP50416 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPT1AP50416 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPT1AP50416 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CPT1AP50416 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CPT1AP50416 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.9■□□□□ 0.46
CPT1AP50416 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.9■□□□□ 0.46
CPT1AP50416 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.9■□□□□ 0.46
CPT1AP50416 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.9■□□□□ 0.46
CPT1AP50416 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CPT1AP50416 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.9■□□□□ 0.46
CPT1AP50416 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CPT1AP50416 LINC01115-203ENST00000606068 577 ntBASIC17.9■□□□□ 0.46
CPT1AP50416 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPT1AP50416 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPT1AP50416 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.9■□□□□ 0.46
CPT1AP50416 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPT1AP50416 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPT1AP50416 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.9■□□□□ 0.46
CPT1AP50416 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPT1AP50416 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.9■□□□□ 0.46
CPT1AP50416 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.9■□□□□ 0.46
CPT1AP50416 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CPT1AP50416 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CPT1AP50416 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
CPT1AP50416 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.89■□□□□ 0.46
CPT1AP50416 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.46
CPT1AP50416 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CPT1AP50416 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPT1AP50416 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPT1AP50416 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CPT1AP50416 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPT1AP50416 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.89■□□□□ 0.45
CPT1AP50416 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CPT1AP50416 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPT1AP50416 BOLA2P3-201ENST00000404566 256 ntBASIC17.89■□□□□ 0.45
CPT1AP50416 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.89■□□□□ 0.45
CPT1AP50416 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.89■□□□□ 0.45
CPT1AP50416 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.89■□□□□ 0.45
CPT1AP50416 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.89■□□□□ 0.45
CPT1AP50416 AP005482.1-201ENST00000563722 1273 ntBASIC17.89■□□□□ 0.45
CPT1AP50416 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.89■□□□□ 0.45
CPT1AP50416 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.89■□□□□ 0.45
CPT1AP50416 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.89■□□□□ 0.45
CPT1AP50416 AC010319.3-201ENST00000597028 470 ntBASIC17.89■□□□□ 0.45
CPT1AP50416 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPT1AP50416 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPT1AP50416 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CPT1AP50416 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CPT1AP50416 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.89■□□□□ 0.45
CPT1AP50416 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPT1AP50416 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CPT1AP50416 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPT1AP50416 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.89■□□□□ 0.45
CPT1AP50416 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.89■□□□□ 0.45
CPT1AP50416 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CPT1AP50416 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
CPT1AP50416 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
CPT1AP50416 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPT1AP50416 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPT1AP50416 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CPT1AP50416 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CPT1AP50416 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CPT1AP50416 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPT1AP50416 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CPT1AP50416 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CPT1AP50416 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPT1AP50416 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPT1AP50416 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CPT1AP50416 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CPT1AP50416 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.88■□□□□ 0.45
CPT1AP50416 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPT1AP50416 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CPT1AP50416 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
CPT1AP50416 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPT1AP50416 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPT1AP50416 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.88■□□□□ 0.45
CPT1AP50416 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.88■□□□□ 0.45
CPT1AP50416 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CPT1AP50416 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.88■□□□□ 0.45
CPT1AP50416 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CPT1AP50416 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.88■□□□□ 0.45
CPT1AP50416 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.88■□□□□ 0.45
CPT1AP50416 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CPT1AP50416 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CPT1AP50416 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.88■□□□□ 0.45
CPT1AP50416 AL158212.4-201ENST00000624062 1286 ntBASIC17.88■□□□□ 0.45
CPT1AP50416 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.88■□□□□ 0.45
CPT1AP50416 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CPT1AP50416 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPT1AP50416 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
CPT1AP50416 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms