Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
TM4SF4P48230 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC18.26■□□□□ 0.51
TM4SF4P48230 AC245100.5-201ENST00000452108 331 ntBASIC18.26■□□□□ 0.51
TM4SF4P48230 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.26■□□□□ 0.51
TM4SF4P48230 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC18.26■□□□□ 0.51
TM4SF4P48230 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC18.26■□□□□ 0.51
TM4SF4P48230 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TM4SF4P48230 AL451050.2-201ENST00000606967 682 ntBASIC18.26■□□□□ 0.51
TM4SF4P48230 AP005019.2-201ENST00000615104 511 ntBASIC18.26■□□□□ 0.51
TM4SF4P48230 AC145423.3-201ENST00000615987 467 ntBASIC18.26■□□□□ 0.51
TM4SF4P48230 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.26■□□□□ 0.51
TM4SF4P48230 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.26■□□□□ 0.51
TM4SF4P48230 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM4SF4P48230 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC18.26■□□□□ 0.51
TM4SF4P48230 AC006453.4-201ENST00000636949 1252 ntBASIC18.26■□□□□ 0.51
TM4SF4P48230 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.26■□□□□ 0.51
TM4SF4P48230 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.26■□□□□ 0.51
TM4SF4P48230 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM4SF4P48230 BNIP3P1-202ENST00000550043 1585 ntBASIC18.25■□□□□ 0.51
TM4SF4P48230 LETM1P2-201ENST00000597330 2178 ntBASIC18.25■□□□□ 0.51
TM4SF4P48230 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC18.25■□□□□ 0.51
TM4SF4P48230 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TM4SF4P48230 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TM4SF4P48230 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TM4SF4P48230 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.25■□□□□ 0.51
TM4SF4P48230 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TM4SF4P48230 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TM4SF4P48230 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TM4SF4P48230 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TM4SF4P48230 MIR33B-201ENST00000385104 96 ntBASIC18.25■□□□□ 0.51
TM4SF4P48230 IGF1-203ENST00000392904 761 ntTSL 5 BASIC18.25■□□□□ 0.51
TM4SF4P48230 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC18.25■□□□□ 0.51
TM4SF4P48230 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC18.25■□□□□ 0.51
TM4SF4P48230 POM121L10P-201ENST00000436994 1285 ntBASIC18.25■□□□□ 0.51
TM4SF4P48230 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC18.25■□□□□ 0.51
TM4SF4P48230 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC18.25■□□□□ 0.51
TM4SF4P48230 RNA5SP486-201ENST00000515961 83 ntBASIC18.25■□□□□ 0.51
TM4SF4P48230 AC126915.1-201ENST00000522847 1038 ntBASIC18.25■□□□□ 0.51
TM4SF4P48230 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC18.25■□□□□ 0.51
TM4SF4P48230 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TM4SF4P48230 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC18.25■□□□□ 0.51
TM4SF4P48230 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC18.25■□□□□ 0.51
TM4SF4P48230 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC18.25■□□□□ 0.51
TM4SF4P48230 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.25■□□□□ 0.51
TM4SF4P48230 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TM4SF4P48230 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
TM4SF4P48230 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC18.25■□□□□ 0.51
TM4SF4P48230 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.25■□□□□ 0.51
TM4SF4P48230 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TM4SF4P48230 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TM4SF4P48230 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.25■□□□□ 0.51
TM4SF4P48230 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TM4SF4P48230 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TM4SF4P48230 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.24■□□□□ 0.51
TM4SF4P48230 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TM4SF4P48230 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TM4SF4P48230 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
TM4SF4P48230 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.24■□□□□ 0.51
TM4SF4P48230 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TM4SF4P48230 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TM4SF4P48230 PTPA-217ENST00000434095 870 ntTSL 2 BASIC18.24■□□□□ 0.51
TM4SF4P48230 MAGEA5-201ENST00000446757 942 ntBASIC18.24■□□□□ 0.51
TM4SF4P48230 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC18.24■□□□□ 0.51
TM4SF4P48230 NKG7-204ENST00000595217 816 ntTSL 2 BASIC18.24■□□□□ 0.51
TM4SF4P48230 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC18.24■□□□□ 0.51
TM4SF4P48230 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TM4SF4P48230 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC18.24■□□□□ 0.51
TM4SF4P48230 AC091812.3-201ENST00000621362 345 ntBASIC18.24■□□□□ 0.51
TM4SF4P48230 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC18.24■□□□□ 0.51
TM4SF4P48230 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TM4SF4P48230 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TM4SF4P48230 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TM4SF4P48230 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TM4SF4P48230 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TM4SF4P48230 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TM4SF4P48230 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.24■□□□□ 0.51
TM4SF4P48230 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TM4SF4P48230 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC18.23■□□□□ 0.51
TM4SF4P48230 AC092978.1-202ENST00000637590 1327 ntBASIC18.23■□□□□ 0.51
TM4SF4P48230 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.23■□□□□ 0.51
TM4SF4P48230 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM4SF4P48230 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TM4SF4P48230 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TM4SF4P48230 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM4SF4P48230 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TM4SF4P48230 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM4SF4P48230 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM4SF4P48230 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TM4SF4P48230 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TM4SF4P48230 HLA-DQB2-229ENST00000411527 1059 ntBASIC18.23■□□□□ 0.51
TM4SF4P48230 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC18.23■□□□□ 0.51
TM4SF4P48230 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC18.23■□□□□ 0.51
TM4SF4P48230 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM4SF4P48230 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC18.23■□□□□ 0.51
TM4SF4P48230 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC18.23■□□□□ 0.51
TM4SF4P48230 KLK3-207ENST00000595952 969 ntTSL 3 BASIC18.23■□□□□ 0.51
TM4SF4P48230 MIR7845-201ENST00000618396 99 ntBASIC18.23■□□□□ 0.51
TM4SF4P48230 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TM4SF4P48230 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TM4SF4P48230 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms