Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
GDNFP39905 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GDNFP39905 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
GDNFP39905 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
GDNFP39905 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
GDNFP39905 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
GDNFP39905 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GDNFP39905 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.26□□□□□ -0.13
GDNFP39905 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GDNFP39905 AC006486.2-201ENST00000624246 2199 ntBASIC14.26□□□□□ -0.13
GDNFP39905 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
GDNFP39905 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GDNFP39905 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GDNFP39905 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.26□□□□□ -0.13
GDNFP39905 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.26□□□□□ -0.13
GDNFP39905 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
GDNFP39905 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.26□□□□□ -0.13
GDNFP39905 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GDNFP39905 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
GDNFP39905 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GDNFP39905 BX005266.1-201ENST00000473402 457 ntBASIC14.26□□□□□ -0.13
GDNFP39905 UNC93B7-201ENST00000509439 705 ntBASIC14.26□□□□□ -0.13
GDNFP39905 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GDNFP39905 AC091304.2-201ENST00000564639 760 ntBASIC14.26□□□□□ -0.13
GDNFP39905 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GDNFP39905 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GDNFP39905 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.26□□□□□ -0.13
GDNFP39905 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.26□□□□□ -0.13
GDNFP39905 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.26□□□□□ -0.13
GDNFP39905 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GDNFP39905 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GDNFP39905 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
GDNFP39905 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GDNFP39905 AC016027.1-202ENST00000607927 1699 ntBASIC14.26□□□□□ -0.13
GDNFP39905 AC138035.3-201ENST00000622706 2791 ntBASIC14.26□□□□□ -0.13
GDNFP39905 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GDNFP39905 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
GDNFP39905 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GDNFP39905 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GDNFP39905 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GDNFP39905 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GDNFP39905 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
GDNFP39905 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GDNFP39905 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.25□□□□□ -0.13
GDNFP39905 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
GDNFP39905 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.25□□□□□ -0.13
GDNFP39905 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GDNFP39905 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
GDNFP39905 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GDNFP39905 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GDNFP39905 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GDNFP39905 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GDNFP39905 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
GDNFP39905 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GDNFP39905 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
GDNFP39905 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GDNFP39905 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GDNFP39905 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
GDNFP39905 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GDNFP39905 AC069224.1-201ENST00000566372 1715 ntBASIC14.25□□□□□ -0.13
GDNFP39905 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
GDNFP39905 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GDNFP39905 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GDNFP39905 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.25□□□□□ -0.13
GDNFP39905 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.25□□□□□ -0.13
GDNFP39905 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GDNFP39905 AL020989.1-201ENST00000422979 469 ntBASIC14.25□□□□□ -0.13
GDNFP39905 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.25□□□□□ -0.13
GDNFP39905 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.25□□□□□ -0.13
GDNFP39905 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
GDNFP39905 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.25□□□□□ -0.13
GDNFP39905 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GDNFP39905 AC106795.1-205ENST00000512851 1056 ntBASIC14.25□□□□□ -0.13
GDNFP39905 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.25□□□□□ -0.13
GDNFP39905 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GDNFP39905 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.25□□□□□ -0.13
GDNFP39905 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.25□□□□□ -0.13
GDNFP39905 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.25□□□□□ -0.13
GDNFP39905 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.25□□□□□ -0.13
GDNFP39905 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.25□□□□□ -0.13
GDNFP39905 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GDNFP39905 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GDNFP39905 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GDNFP39905 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
GDNFP39905 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.25□□□□□ -0.13
GDNFP39905 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.25□□□□□ -0.13
GDNFP39905 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.25□□□□□ -0.13
GDNFP39905 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GDNFP39905 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GDNFP39905 AC079776.2-201ENST00000641154 1609 ntBASIC14.25□□□□□ -0.13
GDNFP39905 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
GDNFP39905 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GDNFP39905 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GDNFP39905 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
GDNFP39905 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.25□□□□□ -0.13
GDNFP39905 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GDNFP39905 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
GDNFP39905 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GDNFP39905 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GDNFP39905 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms